BLASTX nr result

ID: Cephaelis21_contig00049649 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00049649
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera]    70   2e-10
ref|XP_003600156.1| Cellular nucleic acid-binding protein [Medic...    68   7e-10
gb|ABD28293.1| RNA-directed DNA polymerase (Reverse transcriptas...    68   9e-10
ref|XP_003605752.1| Pol polyprotein [Medicago truncatula] gi|355...    68   9e-10
ref|XP_002445353.1| hypothetical protein SORBIDRAFT_07g011900 [S...    67   2e-09

>emb|CAN61139.1| hypothetical protein VITISV_009489 [Vitis vinifera]
          Length = 984

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 28/47 (59%), Positives = 40/47 (85%)
 Frame = -1

Query: 372 VPIMKEFVDVFPDELDTLPPNREIEFEVDLVPGERPISRAPYQMSPV 232
           +PI++E+ DVFP++L  LPP RE+EF +DLVPG  P+S+APY+M+PV
Sbjct: 92  IPIVREYPDVFPEDLPGLPPEREVEFTIDLVPGTGPMSKAPYRMAPV 138


>ref|XP_003600156.1| Cellular nucleic acid-binding protein [Medicago truncatula]
           gi|355489204|gb|AES70407.1| Cellular nucleic
           acid-binding protein [Medicago truncatula]
          Length = 651

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 26/46 (56%), Positives = 38/46 (82%)
 Frame = -1

Query: 375 RVPIMKEFVDVFPDELDTLPPNREIEFEVDLVPGERPISRAPYQMS 238
           R+P++ EF ++FPDE+  +PP RE+EF +DLVPG +P+S APY+MS
Sbjct: 580 RLPVVNEFPEIFPDEIPYVPPEREVEFSIDLVPGTKPVSMAPYRMS 625


>gb|ABD28293.1| RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger,
           CCHC-type; Peptidase aspartic, active site;
           Retrotransposon gag protein [Medicago truncatula]
          Length = 912

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 27/46 (58%), Positives = 38/46 (82%)
 Frame = -1

Query: 375 RVPIMKEFVDVFPDELDTLPPNREIEFEVDLVPGERPISRAPYQMS 238
           R+P++ EF +VFPDE+  +PP RE+EF +DLVPG +P+S APY+MS
Sbjct: 478 RLPVVCEFPEVFPDEIPDVPPEREVEFSIDLVPGTKPVSMAPYRMS 523


>ref|XP_003605752.1| Pol polyprotein [Medicago truncatula] gi|355506807|gb|AES87949.1|
           Pol polyprotein [Medicago truncatula]
          Length = 745

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 27/46 (58%), Positives = 38/46 (82%)
 Frame = -1

Query: 375 RVPIMKEFVDVFPDELDTLPPNREIEFEVDLVPGERPISRAPYQMS 238
           R+P++ EF +VFPDE+  +PP RE+EF +DLVPG +P+S APY+MS
Sbjct: 489 RLPVVCEFPEVFPDEIPDVPPEREVEFSIDLVPGTKPVSMAPYRMS 534


>ref|XP_002445353.1| hypothetical protein SORBIDRAFT_07g011900 [Sorghum bicolor]
           gi|241941703|gb|EES14848.1| hypothetical protein
           SORBIDRAFT_07g011900 [Sorghum bicolor]
          Length = 1488

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 27/46 (58%), Positives = 38/46 (82%)
 Frame = -1

Query: 372 VPIMKEFVDVFPDELDTLPPNREIEFEVDLVPGERPISRAPYQMSP 235
           +P++ EF DVFP++L  LPP+R+IEF++DL+PG  PISR PY+M P
Sbjct: 456 IPVVCEFPDVFPEDLPGLPPDRDIEFKIDLIPGTAPISRRPYRMPP 501


Top