BLASTX nr result

ID: Cephaelis21_contig00049491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00049491
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_006291825.1| orf57 gene product (mitochondrion) [Daucus c...    58   7e-07

>ref|YP_006291825.1| orf57 gene product (mitochondrion) [Daucus carota subsp. sativus]
           gi|374082010|gb|AEY81202.1| orf57 (mitochondrion)
           [Daucus carota subsp. sativus]
          Length = 122

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 2/80 (2%)
 Frame = -1

Query: 235 LIWNVRGIGNKASKRRLRKLCSMHNFSILVLIEPFVSADHAPKLRSFFPFNGFLALD--N 62
           L+WN+RGIGN  S+RR+ KL  M+N S++ ++EP   A+   +  +   FN  LA    +
Sbjct: 5   LLWNIRGIGNIKSRRRVGKLVKMYNISLIAILEPLHHANKIQEFSNRIRFNFSLANQEAD 64

Query: 61  NKIWVLWRSSLVCVQVASSE 2
           +KIW+ W   +  V V + E
Sbjct: 65  DKIWLCWNHEVHVVLVDAFE 84


Top