BLASTX nr result

ID: Cephaelis21_contig00049378 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00049378
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284549.1| PREDICTED: protein AUXIN RESPONSE 4 [Vitis v...    67   5e-20
ref|NP_564672.2| protein auxin RESPONSE 4 [Arabidopsis thaliana]...    66   4e-17
gb|AAL11602.1|AF424608_1 At1g54990/F14C21_5 [Arabidopsis thaliana]     66   4e-17
ref|XP_002891931.1| hypothetical protein ARALYDRAFT_474773 [Arab...    65   6e-17
ref|XP_003626280.1| Protein AUXIN RESPONSE [Medicago truncatula]...    55   8e-16

>ref|XP_002284549.1| PREDICTED: protein AUXIN RESPONSE 4 [Vitis vinifera]
          Length = 474

 Score = 66.6 bits (161), Expect(2) = 5e-20
 Identities = 28/48 (58%), Positives = 39/48 (81%)
 Frame = -1

Query: 361 KSDHKVLIVHGFGCSSFAFRGIVKALGLKGVHAIAIDLPGSGFSNKSM 218
           K+   V+IVHG G SS+AFR +++ LG +GVHA+ +DLPGSGFS+KS+
Sbjct: 110 KASENVVIVHGLGSSSYAFRNVIQFLGSRGVHAVGVDLPGSGFSDKSV 157



 Score = 55.8 bits (133), Expect(2) = 5e-20
 Identities = 27/55 (49%), Positives = 34/55 (61%)
 Frame = -2

Query: 186 GFYGAFGKFIMRFQEKGLFWGFDQLIEKGYVNCEENEIRVWKREVVKAIELGAEE 22
           G  G F +     QEKG FW FD L+E G +  EE +I+V KR+ VK +ELG EE
Sbjct: 166 GVLGRFSEVYSLIQEKGFFWAFDHLVETGQMPYEEIQIQVSKRKSVKVLELGPEE 220


>ref|NP_564672.2| protein auxin RESPONSE 4 [Arabidopsis thaliana]
           gi|75173345|sp|Q9FZ33.1|AXR4_ARATH RecName: Full=Protein
           AUXIN RESPONSE 4 gi|9857523|gb|AAG00878.1|AC064840_9
           Hypothetical protein [Arabidopsis thaliana]
           gi|12322159|gb|AAG51115.1|AC069144_12 unknown protein
           [Arabidopsis thaliana] gi|18377761|gb|AAL67030.1|
           unknown protein [Arabidopsis thaliana]
           gi|21689747|gb|AAM67517.1| unknown protein [Arabidopsis
           thaliana] gi|332195049|gb|AEE33170.1| protein auxin
           RESPONSE 4 [Arabidopsis thaliana]
          Length = 473

 Score = 65.9 bits (159), Expect(2) = 4e-17
 Identities = 28/43 (65%), Positives = 39/43 (90%)
 Frame = -1

Query: 346 VLIVHGFGCSSFAFRGIVKALGLKGVHAIAIDLPGSGFSNKSM 218
           V+IVHG G SSFAF+ ++++LG KG+H++AIDLPG+GFS+KSM
Sbjct: 120 VVIVHGLGLSSFAFKEMIQSLGSKGIHSVAIDLPGNGFSDKSM 162



 Score = 47.0 bits (110), Expect(2) = 4e-17
 Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
 Frame = -2

Query: 189 VGFYGAFGKFIMRFQEKGLFWGFDQLIEKGYVNCEE-NEIRVWKREVVKAIELGAEES 19
           +GF     +     QEKG+FW FDQ+IE G +  EE  +++  KR   KAIELG+EE+
Sbjct: 171 IGFVARVKEVYGLIQEKGVFWAFDQMIETGDLPYEEIIKLQNSKRRSFKAIELGSEET 228


>gb|AAL11602.1|AF424608_1 At1g54990/F14C21_5 [Arabidopsis thaliana]
          Length = 441

 Score = 65.9 bits (159), Expect(2) = 4e-17
 Identities = 28/43 (65%), Positives = 39/43 (90%)
 Frame = -1

Query: 346 VLIVHGFGCSSFAFRGIVKALGLKGVHAIAIDLPGSGFSNKSM 218
           V+IVHG G SSFAF+ ++++LG KG+H++AIDLPG+GFS+KSM
Sbjct: 88  VVIVHGLGLSSFAFKEMIQSLGSKGIHSVAIDLPGNGFSDKSM 130



 Score = 47.0 bits (110), Expect(2) = 4e-17
 Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
 Frame = -2

Query: 189 VGFYGAFGKFIMRFQEKGLFWGFDQLIEKGYVNCEE-NEIRVWKREVVKAIELGAEES 19
           +GF     +     QEKG+FW FDQ+IE G +  EE  +++  KR   KAIELG+EE+
Sbjct: 139 IGFVARVKEVYGLIQEKGVFWAFDQMIETGDLPYEEIIKLQNSKRRSFKAIELGSEET 196


>ref|XP_002891931.1| hypothetical protein ARALYDRAFT_474773 [Arabidopsis lyrata subsp.
           lyrata] gi|297337773|gb|EFH68190.1| hypothetical protein
           ARALYDRAFT_474773 [Arabidopsis lyrata subsp. lyrata]
          Length = 472

 Score = 65.1 bits (157), Expect(2) = 6e-17
 Identities = 29/43 (67%), Positives = 37/43 (86%)
 Frame = -1

Query: 346 VLIVHGFGCSSFAFRGIVKALGLKGVHAIAIDLPGSGFSNKSM 218
           V+IVHG G SSFAF+ +++ALG KG H +AIDLPG+GFS+KSM
Sbjct: 120 VVIVHGLGLSSFAFKEMIQALGSKGFHGVAIDLPGNGFSDKSM 162



 Score = 47.0 bits (110), Expect(2) = 6e-17
 Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
 Frame = -2

Query: 189 VGFYGAFGKFIMRFQEKGLFWGFDQLIEKGYVNCEE-NEIRVWKREVVKAIELGAEES 19
           +GF     +     QEKG+FW FDQ+IE G +  EE  +++  KR   KAIELG+EE+
Sbjct: 171 IGFVARVKEVYGLIQEKGVFWAFDQMIETGDLPYEEIIKLQNSKRRSFKAIELGSEET 228


>ref|XP_003626280.1| Protein AUXIN RESPONSE [Medicago truncatula]
           gi|355501295|gb|AES82498.1| Protein AUXIN RESPONSE
           [Medicago truncatula]
          Length = 494

 Score = 54.7 bits (130), Expect(2) = 8e-16
 Identities = 24/43 (55%), Positives = 35/43 (81%)
 Frame = -1

Query: 346 VLIVHGFGCSSFAFRGIVKALGLKGVHAIAIDLPGSGFSNKSM 218
           VLI+HG   SS+++R ++++L  +GV  IAIDLPGSGFS+KS+
Sbjct: 128 VLILHGQALSSYSYRNLIQSLSTQGVRVIAIDLPGSGFSDKSV 170



 Score = 53.5 bits (127), Expect(2) = 8e-16
 Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
 Frame = -2

Query: 186 GFYGAFGKFIMRFQEKGLFWGFDQLIEKGYVNCEENEIRVWKREVVKAIELGAEE-SQVI 10
           G +G F       +EKG FW FDQ++E G +  EE   R+ KR+V K I+LG EE  +V+
Sbjct: 179 GIFGRFSYVYSEIKEKGFFWAFDQIVETGQIPYEEVLARMSKRKVNKPIDLGPEEIGKVL 238

Query: 9   NEM 1
            E+
Sbjct: 239 GEV 241


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