BLASTX nr result

ID: Cephaelis21_contig00049324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00049324
         (842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    89   1e-15
ref|XP_002446549.1| hypothetical protein SORBIDRAFT_06g017955 [S...    78   3e-12
ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [S...    78   3e-12
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ...    74   5e-11
gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]                72   1e-10

>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 89.0 bits (219), Expect = 1e-15
 Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 28/266 (10%)
 Frame = +2

Query: 2    WDRLAYPAIENGLGVRRLEDIHAAFTCKLWWK-VKSNVGIWAKYLNLVSWQKSWMRSRLA 178
            WDR+  P  + GLG RRL + + AF  KL W  +K    +W + L    W++    S L+
Sbjct: 844  WDRICSPTGKGGLGFRRLHNWNLAFMAKLGWMIIKDETKLWVRILKARYWERG---SFLS 900

Query: 179  AI---------------QEIMASHSVIRIGDG-SYRFWYSHWSPIGPLVP--NSSSPQYL 304
            A+               +E++    V RIG+G S   WY  W   GPLV    S+ P+++
Sbjct: 901  AVGKNHHSPIWRDIVKGRELLEKGLVRRIGNGRSTSLWYHWWVGGGPLVDVMGSNIPEFM 960

Query: 305  -QLTLNQAFLNGEWQ----NHLFE*DMSQEQHATLLSYDLTFTNA*DAEIWSATSSGDFT 469
                ++     G W     +HL   D+ ++     L+   + +   D   W+   +G F+
Sbjct: 961  SHWQVSNIIKRGRWDTKKISHLLPPDILKQIKEIPLA---SMSEVEDDFTWNFEKNGTFS 1017

Query: 470  LSSAFEVVRQRQLP---NSDLVNCWLPQIPTKVSIFLWRLMNYLLPFADVLGQFGFQLPS 640
            + SA+ ++ +R+            W   IP K  + +W  ++ +LP A  L +       
Sbjct: 1018 VKSAYYLINRREEETGGKGSWRGLWRKNIPFKYKLLIWNGIHNILPTALFLAKRIHNFNP 1077

Query: 641  KCVFC-HSLDTLLYCFLECPKAAVLW 715
            +CV C H ++ +++ F +C  A+ +W
Sbjct: 1078 QCVACDHPIEDMIHLFRDCCVASSVW 1103


>ref|XP_002446549.1| hypothetical protein SORBIDRAFT_06g017955 [Sorghum bicolor]
           gi|241937732|gb|EES10877.1| hypothetical protein
           SORBIDRAFT_06g017955 [Sorghum bicolor]
          Length = 292

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 66/260 (25%), Positives = 106/260 (40%), Gaps = 21/260 (8%)
 Frame = +2

Query: 2   WDRLAYPAIENGLGVRRLEDIHAAFTCKLWWKVKSNVGIWAKYLN--------LVSWQKS 157
           W+ L  P  + G+G+  L+  +     K  +K+ +  G+W + L         L S  K 
Sbjct: 35  WEVLCQPRDQGGIGIYNLDIQNKCLLSKWLFKLLNEDGMWQELLRNKYIKDKTLGSCVKK 94

Query: 158 WMRSR----LAAIQEIMASHSVIRIGDGSY-RFWYSHWSPIGPLVPNSSS--------PQ 298
              S     L  I+++       +I DGS  RFW   W    PL     S          
Sbjct: 95  STDSHFWKSLMNIKDLFMEFGSFKINDGSQTRFWVDTWLGNKPLKDKFPSLFNIVRRKHD 154

Query: 299 YLQLTLNQAFLNGEWQNHLFE*DMSQEQHATLLSYDLTFTNA*DAEIWSATSSGDFTLSS 478
            +   L+   LN  ++ +L   ++S         +DL  T   D  IW  ++SG FT+ S
Sbjct: 155 SVAQVLSSIPLNISFRRNLVGANLSAWNRIVASIHDLNLTEHRDEFIWGLSASGIFTVKS 214

Query: 479 AFEVVRQRQLPNSDLVNCWLPQIPTKVSIFLWRLMNYLLPFADVLGQFGFQLPSKCVFCH 658
            +  +    +  S   + W  ++P K+ IFLW L   ++   D L +  +     C FCH
Sbjct: 215 MYAALINNGVRVSK--DIWQIKVPMKIKIFLWYLKKGVVLTKDNLVKRNWDGDKHCCFCH 272

Query: 659 SLDTLLYCFLECPKAAVLWR 718
             +T+ + F  C  A  LWR
Sbjct: 273 VSETIQHLFFGCIHAKFLWR 292


>ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [Sorghum bicolor]
            gi|241936686|gb|EES09831.1| hypothetical protein
            SORBIDRAFT_05g019526 [Sorghum bicolor]
          Length = 1209

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 37/275 (13%)
 Frame = +2

Query: 2    WDRLAYPAIENGLGVRRLEDIHAAFTCKLWWKVKSNVG-IWAKYLNLVSWQKS-WMRSRL 175
            WD +  P    GLG R +E  + A   K  W+V S    + A+ L  V +  + ++++RL
Sbjct: 884  WDDMIKPKFLGGLGFRDIELFNLALLAKQAWRVLSGANSLSARILKAVYFPDTEFLQARL 943

Query: 176  AAI-----------QEIMASHSVIRIGDGSYRF-WYSHWSPIGPLVP-----NSSSPQYL 304
                          ++++    + RIG G   + W  +W P   L+       ++ PQ +
Sbjct: 944  GNAPSRIWRSILDGRDVLEQGLIRRIGTGEATYIWTMNWLPRDSLLRPVMRVQANLPQKV 1003

Query: 305  QLTLNQAFLNGEWQN-HLFE*DMSQEQHATLLSYDLTFTNA*DAEIWSATSSGDFTLSSA 481
               ++   ++ + Q  H F   M +E   T+++  L+     D   W    +G FT+ SA
Sbjct: 1004 SELIDSTTMSWDMQKLHEFFAPMDRE---TIVNIPLSTRRQSDFWAWHYDKNGIFTVRSA 1060

Query: 482  FEVVRQRQ-----------------LPNSDLVNCWLPQIPTKVSIFLWRLMNYLLPFADV 610
            + ++  R+                     +    W  Q+P+K+ +FLWRL    LP  DV
Sbjct: 1061 YRMLVLRKNNMTACSDSVAGRSSTKADEKEWTALWHVQVPSKIKVFLWRLARQSLPSGDV 1120

Query: 611  LGQFGFQLPSKCVFCHSLDTLLYCFLECPKAAVLW 715
            L     +  S C  C +LD+  +  ++C  A  +W
Sbjct: 1121 LHHRNLKAQSTCAICGALDSWKHSLIDCHMAKCVW 1155


>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein [Arabidopsis
            thaliana]
          Length = 1223

 Score = 73.6 bits (179), Expect = 5e-11
 Identities = 63/263 (23%), Positives = 111/263 (42%), Gaps = 25/263 (9%)
 Frame = +2

Query: 2    WDRLAYPAIENGLGVRRLEDIHAAFTCKLWWKVKSNV-GIWAKYL------NLVSW---- 148
            W  +  P  E GLG+R L++ +     KL WK+ S+   +W K++      N   W    
Sbjct: 862  WHMVCKPKDEGGLGLRSLKEANDVCCLKLVWKIVSHSNSLWVKWVDQHLLRNASFWEVKQ 921

Query: 149  ---QKSWMRSRLAAIQEIMASHSVIRIGDGSY-RFWYSHWSPIGPLVPNSSSPQYLQL-- 310
               Q SW+  +L   +E+  + S + +G+G    FWY +WS +G L+  +     + L  
Sbjct: 922  TVSQGSWIWKKLLKYREVAKTLSKVEVGNGKQTSFWYDNWSDLGQLLERTGDRGLIDLGI 981

Query: 311  ----TLNQAFLNGEWQNHLFE*DMSQEQHATLLSYDLTFTNA*DAEIWSATSSGDFTLSS 478
                T+ +A+ N   + H  +   +  + A   S+D T T   D  +W   S    T  S
Sbjct: 982  SRRMTVEEAWTNRRQRRHRND-VYNVIEDALKKSWD-TRTETEDKVLWRGKSDVFRTTFS 1039

Query: 479  AFEVVRQRQLPNSDL---VNCWLPQIPTKVSIFLWRLMNYLLPFADVLGQFGFQLPSKCV 649
              +     +  ++ +      W      K S   W   +  LP  D +  +   + + C+
Sbjct: 1040 TRDTWHHTRSTSARVPWHKVIWFSHATPKYSFCSWLAAHGRLPTGDRMINWANGIATDCI 1099

Query: 650  FCH-SLDTLLYCFLECPKAAVLW 715
            FC  +L+T  + F  C   +V+W
Sbjct: 1100 FCQGTLETRDHLFFTCSFTSVIW 1122


>gb|AAF98181.1|AC000107_4 F17F8.5 [Arabidopsis thaliana]
          Length = 872

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 60/269 (22%), Positives = 112/269 (41%), Gaps = 31/269 (11%)
 Frame = +2

Query: 2    WDRLAYPAIENGLGVRRLEDIHAAFTCKLWWKVKSNV-GIWAKY-------------LNL 139
            WD +  P  E GLG+R L++ +     KL W++ SN   +W K+             L  
Sbjct: 509  WDIVCKPKAEGGLGLRNLKEANDVSCLKLVWRIISNSNSLWTKWVAEYLIRKKSIWSLKQ 568

Query: 140  VSWQKSWMRSRLAAIQEIMASHSVIRIGDG-SYRFWYSHWSPIGPLVPNSSSPQYLQLTL 316
             +   SW+  ++  I+++  S S + +G+G S  FWY HWS  G L+        + L +
Sbjct: 569  STSMGSWIWRKILKIRDVAKSFSRVEVGNGESASFWYDHWSAHGRLIDTVGDKGTIDLGI 628

Query: 317  -NQAFLNGEWQNHLFE*DMSQEQHAT--------LLSYD-LTFTNA*DAEIWSATS---S 457
              +A +   W         S+ +H T        +++Y  +  ++A D  +W   +    
Sbjct: 629  PREASVADAWTRR------SRRRHRTSLLNEIEEMMAYQRIHHSDAEDTVLWRGKNDVFK 682

Query: 458  GDFTLSSAFEVVRQRQLPNSDLVNCWLPQIPTKVSIFLWRLMNYLLPFADVLGQFGF--Q 631
              F+    + +++      S     W      K ++  W  ++  LP  D + ++     
Sbjct: 683  PHFSTRDTWHLIKATSSTVSWHKGVWFRHATPKYALCTWLAIHNRLPTGDRMLKWNSSGS 742

Query: 632  LPSKCVFC-HSLDTLLYCFLECPKAAVLW 715
            +   CV C ++  TL + F  C  A+ +W
Sbjct: 743  VSGNCVLCTNNSKTLEHLFFSCSYASTVW 771


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