BLASTX nr result

ID: Cephaelis21_contig00049305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00049305
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containi...    99   3e-19
ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|2...    99   5e-19
ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-18
ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containi...    97   2e-18
gb|EEC71803.1| hypothetical protein OsI_04433 [Oryza sativa Indi...    97   2e-18

>ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449474033|ref|XP_004154055.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449510921|ref|XP_004163811.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 43/49 (87%), Positives = 43/49 (87%)
 Frame = +2

Query: 2   RITKNLRLCEDCHSFTKFISKFGGREIFVRDTNRFHHFKDGVCSCADYW 148
           RITKNLRLCEDCHS TKFISKF  REI VRD NRFHHFKDGVCSC DYW
Sbjct: 601 RITKNLRLCEDCHSVTKFISKFADREIMVRDLNRFHHFKDGVCSCGDYW 649


>ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|222849824|gb|EEE87371.1|
           predicted protein [Populus trichocarpa]
          Length = 650

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 41/49 (83%), Positives = 44/49 (89%)
 Frame = +2

Query: 2   RITKNLRLCEDCHSFTKFISKFGGREIFVRDTNRFHHFKDGVCSCADYW 148
           RITK+LRLCEDCHSFTKFISKF  +EI VRD NRFHHF+DGVCSC DYW
Sbjct: 602 RITKSLRLCEDCHSFTKFISKFANKEILVRDVNRFHHFRDGVCSCGDYW 650


>ref|XP_003567268.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Brachypodium distachyon]
          Length = 654

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 42/49 (85%), Positives = 43/49 (87%)
 Frame = +2

Query: 2   RITKNLRLCEDCHSFTKFISKFGGREIFVRDTNRFHHFKDGVCSCADYW 148
           RITKNLRLCEDCHS TKFISKF  REI VRD NRFHHF+DGVCSC DYW
Sbjct: 606 RITKNLRLCEDCHSVTKFISKFTEREIVVRDVNRFHHFRDGVCSCGDYW 654


>ref|XP_003552616.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 658

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 41/49 (83%), Positives = 42/49 (85%)
 Frame = +2

Query: 2   RITKNLRLCEDCHSFTKFISKFGGREIFVRDTNRFHHFKDGVCSCADYW 148
           RI KNLRLCEDCH+ TKFISKF  REI VRD NRFHHFKDGVCSC DYW
Sbjct: 610 RIRKNLRLCEDCHAVTKFISKFANREILVRDVNRFHHFKDGVCSCGDYW 658


>gb|EEC71803.1| hypothetical protein OsI_04433 [Oryza sativa Indica Group]
          Length = 437

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 40/49 (81%), Positives = 43/49 (87%)
 Frame = +2

Query: 2   RITKNLRLCEDCHSFTKFISKFGGREIFVRDTNRFHHFKDGVCSCADYW 148
           RITKNLRLCEDCHS TKFISK+  REI VRD NRFHHF+DG+CSC DYW
Sbjct: 389 RITKNLRLCEDCHSVTKFISKYAEREIIVRDVNRFHHFRDGICSCGDYW 437


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