BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00049249
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK29467.1| polyprotein-like [Solanum chilense]                     94   1e-17
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    91   1e-16
emb|CAN77764.1| hypothetical protein VITISV_026762 [Vitis vinifera]    73   2e-11
emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera]    72   6e-11
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]          72   6e-11

>gb|AAK29467.1| polyprotein-like [Solanum chilense]
          Length = 1328

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/103 (44%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
 Frame = -2

Query: 308 VTLVLSQ*EFC-HIADTNSEWIVDSKTFYHCVPQGEYFSTHKAEDFGTITMDNKVFLREW 132
           V L++++ E C H+A T SEW+VD+   YH  P  + F  + A D+G + M N  + +  
Sbjct: 275 VVLLINEEEECMHLAGTESEWVVDTAASYHATPVRDLFCRYVAGDYGNVKMGNTSYSKIA 334

Query: 131 GSVTSA*RPTVGCTLTLKDVRHIPDLRLNLISARTLDNEGYEH 3
           G      +  VGCTL LKDVRH+PDLR+NLIS   LD +GYE+
Sbjct: 335 GIGDICFKTNVGCTLVLKDVRHVPDLRMNLISGIALDQDGYEN 377


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon
           TNT 1-94; Includes: RecName: Full=Protease; Includes:
           RecName: Full=Reverse transcriptase; Includes: RecName:
           Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
           protein product [Nicotiana tabacum]
          Length = 1328

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 45/102 (44%), Positives = 62/102 (60%), Gaps = 1/102 (0%)
 Frame = -2

Query: 308 VTLVLSQ*EFC-HIADTNSEWIVDSKTFYHCVPQGEYFSTHKAEDFGTITMDNKVFLREW 132
           V L +++ E C H++   SEW+VD+   +H  P  + F  + A DFGT+ M N  + +  
Sbjct: 274 VVLFINEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIA 333

Query: 131 GSVTSA*RPTVGCTLTLKDVRHIPDLRLNLISARTLDNEGYE 6
           G      +  VGCTL LKDVRH+PDLR+NLIS   LD +GYE
Sbjct: 334 GIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDGYE 375


>emb|CAN77764.1| hypothetical protein VITISV_026762 [Vitis vinifera]
          Length = 343

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 34/99 (34%), Positives = 56/99 (56%)
 Frame = -2

Query: 305 TLVLSQ*EFCHIADTNSEWIVDSKTFYHCVPQGEYFSTHKAEDFGTITMDNKVFLREWGS 126
           T+++    + ++A  +S W+VD+ T +H      +FS++    FG + M N+      G 
Sbjct: 57  TIIVCDDAYVNLACQDSTWVVDTATSFHITAHRNFFSSYTNGRFGWVRMGNEAKCEIVGM 116

Query: 125 VTSA*RPTVGCTLTLKDVRHIPDLRLNLISARTLDNEGY 9
                  ++GC L LKDV+H+P++R +LIS   LDNEGY
Sbjct: 117 EDVELETSIGCKLVLKDVKHVPEMRFSLISVGKLDNEGY 155


>emb|CAN65406.1| hypothetical protein VITISV_030853 [Vitis vinifera]
          Length = 1017

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/97 (35%), Positives = 56/97 (57%)
 Frame = -2

Query: 302 LVLSQ*EFCHIADTNSEWIVDSKTFYHCVPQGEYFSTHKAEDFGTITMDNKVFLREWGSV 123
           L++   +  + A   + W++DS    H  P+ ++F+++   DFG++ M N    +  G  
Sbjct: 28  LIVYDSDVVNFACQETSWVIDSGASIHATPRKDFFTSYTFSDFGSVRMGNDGLAKAIGMG 87

Query: 122 TSA*RPTVGCTLTLKDVRHIPDLRLNLISARTLDNEG 12
                 + G  LTLK+V+HIPD+R+NLIS R LD+EG
Sbjct: 88  DVRLETSNGTMLTLKNVKHIPDIRMNLISTRKLDDEG 124


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/89 (39%), Positives = 54/89 (60%)
 Frame = -2

Query: 275 HIADTNSEWIVDSKTFYHCVPQGEYFSTHKAEDFGTITMDNKVFLREWGSVTSA*RPTVG 96
           ++A   + WIVDS   YH  P+ E+F+++   DFG + M N   ++  G+ T     + G
Sbjct: 281 NVACHETTWIVDSGAAYHVTPRKEFFTSYTPGDFGELRMGNDGQVKVTGTGTVCLETSNG 340

Query: 95  CTLTLKDVRHIPDLRLNLISARTLDNEGY 9
             L LK+V+H PD+RLNLIS   LD++G+
Sbjct: 341 TKLVLKNVKHAPDIRLNLISTGKLDDDGF 369