BLASTX nr result

ID: Cephaelis21_contig00049185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00049185
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284718.1| PREDICTED: uncharacterized protein LOC100250...    58   9e-07
ref|XP_004009411.1| PREDICTED: zinc finger RNA-binding protein-l...    57   2e-06
ref|XP_003421968.1| PREDICTED: zinc finger RNA-binding protein 2...    56   3e-06

>ref|XP_002284718.1| PREDICTED: uncharacterized protein LOC100250232 [Vitis vinifera]
          Length = 223

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/93 (38%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
 Frame = -2

Query: 261 NPGPSVCP----GSTHSEMARKTTTSSPNCLPNQPSLPCVAGNGPAT-----FCHICKVD 109
           NP PS  P    GS  S + RK  TSS NC P Q   P    N   T     FC +C+V 
Sbjct: 40  NPVPSSSPRPSSGSKFSGIKRKAPTSSFNCQPRQMLQPVDHSNTLKTQRDDLFCKVCQVP 99

Query: 108 CSNPFNYKQHLKGHKHRAKLQYMRMRGNAADDG 10
           CS   + KQHL G KH+ +LQ +       ++G
Sbjct: 100 CSGANSLKQHLLGQKHKDRLQNLTPSMGIGEEG 132


>ref|XP_004009411.1| PREDICTED: zinc finger RNA-binding protein-like [Ovis aries]
          Length = 905

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 40/125 (32%), Positives = 57/125 (45%), Gaps = 2/125 (1%)
 Frame = -2

Query: 378 PGTGPHSISIRTVVAGQQVPVSVPNPKLSPVLTENKRASNPGPSVCPGSTHSEMARKTTT 199
           PG GP+S  + T    Q  P   P P   PV  ++ +   PG S      HS +A+K   
Sbjct: 181 PGAGPYSPPLLTP---QMQPPPPPPPPPKPV--DSSQWGGPGGSPSASCAHS-IAKKLPV 234

Query: 198 SSPNCLPNQPSLPCVAGNGPATFCHICKVDCSNPFNYKQHLKGHKHRAK--LQYMRMRGN 25
            S    P     P      P  +C ICK+ C+ P  Y++HL+G KH+ K   Q M ++ N
Sbjct: 235 PSKLPRPRTGPQPL-----PLHYCDICKISCAGPQTYREHLEGQKHKKKEAAQKMGVQPN 289

Query: 24  AADDG 10
            +  G
Sbjct: 290 GSPRG 294


>ref|XP_003421968.1| PREDICTED: zinc finger RNA-binding protein 2-like [Loxodonta
           africana]
          Length = 1340

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 30/90 (33%), Positives = 42/90 (46%)
 Frame = -2

Query: 321 PVSVPNPKLSPVLTENKRASNPGPSVCPGSTHSEMARKTTTSSPNCLPNQPSLPCVAGNG 142
           P  +P P L P  +    AS   PSV PG+  S   +     S    P QP         
Sbjct: 596 PPPLPPPLLKPASSSLWGASGSSPSVSPGAIGSFPTKPARARSG---PKQP--------- 643

Query: 141 PATFCHICKVDCSNPFNYKQHLKGHKHRAK 52
           P  +C +CK+ C+ P  Y++HL+G KH+ K
Sbjct: 644 PVHYCEVCKISCAGPQTYREHLEGQKHKKK 673


Top