BLASTX nr result

ID: Cephaelis21_contig00049149 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00049149
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37965.3| unnamed protein product [Vitis vinifera]               92   4e-17
ref|XP_002275925.1| PREDICTED: putative pentatricopeptide repeat...    92   4e-17
ref|XP_002513017.1| pentatricopeptide repeat-containing protein,...    86   3e-15
ref|XP_004158417.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    80   2e-13
ref|XP_004147057.1| PREDICTED: pentatricopeptide repeat-containi...    80   2e-13

>emb|CBI37965.3| unnamed protein product [Vitis vinifera]
          Length = 371

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 44/70 (62%), Positives = 50/70 (71%)
 Frame = -3

Query: 331 LLGACNECGNVELGXXXXXXXXXLEPHNTGIYVLLSNMYANYGMWNEIGQLRESMKGRKL 152
           LL ACNE GNVELG         ++PHN GIYVLLSNMYA + MW+EIGQLRE MK   L
Sbjct: 299 LLNACNEFGNVELGKLAAHKALEMDPHNVGIYVLLSNMYAKFSMWDEIGQLRELMKESGL 358

Query: 151 MKDIGCSWID 122
            KD+G SWI+
Sbjct: 359 KKDVGRSWIE 368


>ref|XP_002275925.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Vitis vinifera]
          Length = 349

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 44/70 (62%), Positives = 50/70 (71%)
 Frame = -3

Query: 331 LLGACNECGNVELGXXXXXXXXXLEPHNTGIYVLLSNMYANYGMWNEIGQLRESMKGRKL 152
           LL ACNE GNVELG         ++PHN GIYVLLSNMYA + MW+EIGQLRE MK   L
Sbjct: 277 LLNACNEFGNVELGKLAAHKALEMDPHNVGIYVLLSNMYAKFSMWDEIGQLRELMKESGL 336

Query: 151 MKDIGCSWID 122
            KD+G SWI+
Sbjct: 337 KKDVGRSWIE 346


>ref|XP_002513017.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548028|gb|EEF49520.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 349

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 39/70 (55%), Positives = 48/70 (68%)
 Frame = -3

Query: 331 LLGACNECGNVELGXXXXXXXXXLEPHNTGIYVLLSNMYANYGMWNEIGQLRESMKGRKL 152
           +L AC E GN+E G         LEP N GIYV+LSN+YA +GMW+EI  LR+ MK R L
Sbjct: 277 VLSACEEHGNIEFGKLAAREALKLEPQNVGIYVMLSNLYARFGMWDEIDHLRKIMKDRGL 336

Query: 151 MKDIGCSWID 122
            KD+GCSWI+
Sbjct: 337 KKDVGCSWIE 346


>ref|XP_004158417.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g18750, chloroplastic-like [Cucumis sativus]
          Length = 497

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/70 (52%), Positives = 48/70 (68%)
 Frame = -3

Query: 331 LLGACNECGNVELGXXXXXXXXXLEPHNTGIYVLLSNMYANYGMWNEIGQLRESMKGRKL 152
           LL AC E GN++LG         L+P NTGI V+LSN+YA +G+WNEI  LRES++   L
Sbjct: 425 LLRACLEQGNIKLGNLAARRALELDPQNTGILVMLSNLYAGFGLWNEIEHLRESVRKEGL 484

Query: 151 MKDIGCSWID 122
            KD+ CSWI+
Sbjct: 485 YKDVACSWIE 494


>ref|XP_004147057.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 469

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/70 (52%), Positives = 48/70 (68%)
 Frame = -3

Query: 331 LLGACNECGNVELGXXXXXXXXXLEPHNTGIYVLLSNMYANYGMWNEIGQLRESMKGRKL 152
           LL AC E GN++LG         L+P NTGI V+LSN+YA +G+WNEI  LRES++   L
Sbjct: 397 LLRACLEQGNIKLGNLAARRALELDPQNTGILVMLSNLYAGFGLWNEIEHLRESVRKEGL 456

Query: 151 MKDIGCSWID 122
            KD+ CSWI+
Sbjct: 457 YKDVACSWIE 466


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