BLASTX nr result

ID: Cephaelis21_contig00049122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00049122
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S...    73   2e-11
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...    72   5e-11
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo...    72   5e-11
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...    72   5e-11
gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    71   8e-11

>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
           gi|241926916|gb|EES00061.1| hypothetical protein
           SORBIDRAFT_03g001780 [Sorghum bicolor]
          Length = 631

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 39/88 (44%), Positives = 56/88 (63%)
 Frame = +2

Query: 29  DDSLVFCKASMEQAMELKRILELYGKCSAQELNLQKSSIIFSKNTKQESKIRICSILAGI 208
           DDSL+  +A    A+EL+RIL++Y K S Q +N +KSS++FS NT Q  +  + S L+  
Sbjct: 264 DDSLILMRARASDALELRRILDVYEKASGQVINKEKSSMMFSPNTGQHDRSLMRSNLSIT 323

Query: 209 QEQTKAKYLGLPLVIGRSGFVPFWRVSK 292
            E +  KYLGLP+ IG+S   PF  + K
Sbjct: 324 DEASTEKYLGLPVNIGKSRKKPFEYIKK 351


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/78 (43%), Positives = 52/78 (66%)
 Frame = +2

Query: 29   DDSLVFCKASMEQAMELKRILELYGKCSAQELNLQKSSIIFSKNTKQESKIRICSILAGI 208
            DDSL+ C+A+  +A +L+ IL++Y +CS Q +N  KS+++FS NT    K  + + L   
Sbjct: 884  DDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQ 943

Query: 209  QEQTKAKYLGLPLVIGRS 262
            +E T  KYLGLP+ +GRS
Sbjct: 944  RETTNEKYLGLPVFVGRS 961


>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
          Length = 1594

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/78 (43%), Positives = 52/78 (66%)
 Frame = +2

Query: 29   DDSLVFCKASMEQAMELKRILELYGKCSAQELNLQKSSIIFSKNTKQESKIRICSILAGI 208
            DDSL+ C+A+  +A +L+ IL++Y +CS Q +N  KS+++FS NT    K  + + L   
Sbjct: 912  DDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQ 971

Query: 209  QEQTKAKYLGLPLVIGRS 262
            +E T  KYLGLP+ +GRS
Sbjct: 972  RETTNEKYLGLPVFVGRS 989


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/78 (43%), Positives = 52/78 (66%)
 Frame = +2

Query: 29   DDSLVFCKASMEQAMELKRILELYGKCSAQELNLQKSSIIFSKNTKQESKIRICSILAGI 208
            DDSL+ C+A+  +A +L+ IL++Y +CS Q +N  KS+++FS NT    K  + + L   
Sbjct: 880  DDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKGAVMAALNMQ 939

Query: 209  QEQTKAKYLGLPLVIGRS 262
            +E T  KYLGLP+ +GRS
Sbjct: 940  RETTNEKYLGLPVFVGRS 957


>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 33/78 (42%), Positives = 52/78 (66%)
 Frame = +2

Query: 29   DDSLVFCKASMEQAMELKRILELYGKCSAQELNLQKSSIIFSKNTKQESKIRICSILAGI 208
            DDSL+ C+A+  +A +L+ IL++Y +CS Q +N  KS+++FS NT    K  + + L   
Sbjct: 939  DDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKRAVMAALNMQ 998

Query: 209  QEQTKAKYLGLPLVIGRS 262
            +E T  +YLGLP+ +GRS
Sbjct: 999  RETTNERYLGLPVFVGRS 1016


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