BLASTX nr result

ID: Cephaelis21_contig00049045 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00049045
         (920 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002880221.1| zinc finger family protein [Arabidopsis lyra...   164   3e-38
ref|NP_182139.1| RING-H2 finger protein ATL67 [Arabidopsis thali...   162   8e-38
ref|XP_002320162.1| predicted protein [Populus trichocarpa] gi|2...   159   7e-37
emb|CBI40419.3| unnamed protein product [Vitis vinifera]              158   1e-36
emb|CAN73279.1| hypothetical protein VITISV_040608 [Vitis vinifera]   158   1e-36

>ref|XP_002880221.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326060|gb|EFH56480.1| zinc finger family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 214

 Score =  164 bits (415), Expect = 3e-38
 Identities = 90/162 (55%), Positives = 102/162 (62%), Gaps = 6/162 (3%)
 Frame = +1

Query: 106 LGSVGLGYAIAIAFGFLVFLSTVLLASYICCXXXXXXXXXXXLDTESTLHNPDHPNETSI 285
           L ++G GY+IAIA GFLV LSTVLL+SYICC             T +     DH    S+
Sbjct: 30  LTTLGFGYSIAIALGFLVLLSTVLLSSYICCRDSRRR-------TTAVESAGDHGG--SV 80

Query: 286 YLPRIIFVAXXXXXXXXXXXXXXXGLDLAVINSYPKFQFSKRF------GSFGGNDTVCP 447
            LPRIIFVA               GLD AVINSYPKF FSK        G  GG DT C 
Sbjct: 81  ILPRIIFVAEEDNEDLEAGDVVV-GLDQAVINSYPKFHFSKDSSAASSDGFGGGGDTTCS 139

Query: 448 ICLCEYKESEMLRLLPDCKHYFHVTCIDAWLKLNASCPVCRN 573
           ICLCEYKE+EMLR++P+CKHYFH+ C+DAWLKLN SCPVCRN
Sbjct: 140 ICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRN 181


>ref|NP_182139.1| RING-H2 finger protein ATL67 [Arabidopsis thaliana]
           gi|68565091|sp|O82353.1|ATL67_ARATH RecName:
           Full=RING-H2 finger protein ATL67
           gi|3702333|gb|AAC62890.1| hypothetical protein
           [Arabidopsis thaliana] gi|18491265|gb|AAL69457.1|
           At2g46160/T3F17.19 [Arabidopsis thaliana]
           gi|330255556|gb|AEC10650.1| RING-H2 finger protein ATL67
           [Arabidopsis thaliana]
          Length = 214

 Score =  162 bits (411), Expect = 8e-38
 Identities = 88/162 (54%), Positives = 100/162 (61%), Gaps = 6/162 (3%)
 Frame = +1

Query: 106 LGSVGLGYAIAIAFGFLVFLSTVLLASYICCXXXXXXXXXXXLDTESTLHNPDHPNETSI 285
           L ++G GY+IAIA GFLV LSTVLL+SYICC               +T          S+
Sbjct: 30  LTTLGFGYSIAIALGFLVLLSTVLLSSYICCRDSRR---------RTTAVESTGDRGGSV 80

Query: 286 YLPRIIFVAXXXXXXXXXXXXXXXGLDLAVINSYPKFQFSKRF------GSFGGNDTVCP 447
            LPRIIFVA               GLD AVINSYPKF FSK        G  GG DT C 
Sbjct: 81  ILPRIIFVAEEDNEDLEAGDVVV-GLDQAVINSYPKFHFSKDTSAASSDGFGGGGDTTCS 139

Query: 448 ICLCEYKESEMLRLLPDCKHYFHVTCIDAWLKLNASCPVCRN 573
           ICLCEYKE+EMLR++P+CKHYFH+ C+DAWLKLN SCPVCRN
Sbjct: 140 ICLCEYKEAEMLRMMPECKHYFHLCCLDAWLKLNGSCPVCRN 181


>ref|XP_002320162.1| predicted protein [Populus trichocarpa] gi|222860935|gb|EEE98477.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  159 bits (403), Expect = 7e-37
 Identities = 86/161 (53%), Positives = 102/161 (63%), Gaps = 5/161 (3%)
 Frame = +1

Query: 106 LGSVGLGYAIAIAFGFLVFLSTVLLASYICCXXXXXXXXXXXLDTESTLHNPDHPNETS- 282
           L ++GLGY+IAIA  FLV LST+LLASYICC               S  +N ++ N T+ 
Sbjct: 24  LTNLGLGYSIAIALFFLVLLSTILLASYICCRTNRHR------SRNSNNNNNNYANSTAD 77

Query: 283 -IYLPRIIFVAXXXXXXXXXXXXXXXGLDLAVINSYPKFQFSKRFGSFGGNDT---VCPI 450
            I LPRIIFVA               GL+ AVINSYPKFQFSK  G     +     C I
Sbjct: 78  GIILPRIIFVAEDDEEQERDLESAAVGLNQAVINSYPKFQFSKDGGFSERTNNFCNTCSI 137

Query: 451 CLCEYKESEMLRLLPDCKHYFHVTCIDAWLKLNASCPVCRN 573
           CLCEYK+ EMLR++PDC+HYFH+ C+DAWLKLN SCPVCRN
Sbjct: 138 CLCEYKDLEMLRMMPDCRHYFHLLCLDAWLKLNGSCPVCRN 178


>emb|CBI40419.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score =  158 bits (400), Expect = 1e-36
 Identities = 89/156 (57%), Positives = 102/156 (65%)
 Frame = +1

Query: 106 LGSVGLGYAIAIAFGFLVFLSTVLLASYICCXXXXXXXXXXXLDTESTLHNPDHPNETSI 285
           L ++GLGYAIAIAF FLV LSTVLLASY+CC            +  S  ++ D      I
Sbjct: 85  LSNLGLGYAIAIAFAFLVLLSTVLLASYLCCRRRPLSPHHSR-NPASAANSSD-----GI 138

Query: 286 YLPRIIFVAXXXXXXXXXXXXXXXGLDLAVINSYPKFQFSKRFGSFGGNDTVCPICLCEY 465
            LPRIIFVA               GLD AVI+SYPKF FSK   S    D+VC ICLCEY
Sbjct: 139 VLPRIIFVAEDEDEDQNVVV----GLDQAVIDSYPKFPFSK---SNTHLDSVCSICLCEY 191

Query: 466 KESEMLRLLPDCKHYFHVTCIDAWLKLNASCPVCRN 573
           K+SEMLR+LPDC+H FH+ C+DAWLKLNASCPVCRN
Sbjct: 192 KDSEMLRMLPDCRHCFHLYCVDAWLKLNASCPVCRN 227


>emb|CAN73279.1| hypothetical protein VITISV_040608 [Vitis vinifera]
          Length = 641

 Score =  158 bits (400), Expect = 1e-36
 Identities = 89/156 (57%), Positives = 102/156 (65%)
 Frame = +1

Query: 106 LGSVGLGYAIAIAFGFLVFLSTVLLASYICCXXXXXXXXXXXLDTESTLHNPDHPNETSI 285
           L ++GLGYAIAIAF FLV LSTVLLASY+CC            +  S  ++ D      I
Sbjct: 28  LSNLGLGYAIAIAFAFLVLLSTVLLASYLCCRRRPLSPHHSR-NPASAANSSD-----GI 81

Query: 286 YLPRIIFVAXXXXXXXXXXXXXXXGLDLAVINSYPKFQFSKRFGSFGGNDTVCPICLCEY 465
            LPRIIFVA               GLD AVI+SYPKF FSK   S    D+VC ICLCEY
Sbjct: 82  VLPRIIFVAEDEDEDQNVVV----GLDQAVIDSYPKFPFSK---SNTHLDSVCSICLCEY 134

Query: 466 KESEMLRLLPDCKHYFHVTCIDAWLKLNASCPVCRN 573
           K+SEMLR+LPDC+H FH+ C+DAWLKLNASCPVCRN
Sbjct: 135 KDSEMLRMLPDCRHCFHLYCVDAWLKLNASCPVCRN 170


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