BLASTX nr result

ID: Cephaelis21_contig00048903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00048903
         (537 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP54937.2| retrotransposon protein, putative, unclassified [...    78   3e-29
gb|ABA95339.2| retrotransposon protein, putative, unclassified [...    82   3e-29
emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]    77   2e-28
ref|XP_002443111.1| hypothetical protein SORBIDRAFT_08g008675 [S...    77   9e-28
ref|XP_002448587.1| hypothetical protein SORBIDRAFT_06g029685 [S...    77   1e-27

>gb|AAP54937.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1477

 Score = 78.2 bits (191), Expect(2) = 3e-29
 Identities = 44/97 (45%), Positives = 56/97 (57%)
 Frame = +2

Query: 98  QLLANTKAESSSYNLFAAITEGCGEQVSIPCEVSQLLSEFSDVFAIPKTLPPTRTLDHHI 277
           QL++  K  S  Y +     +   EQ S P  + Q+L E+ DVF  P  LPP R  DH I
Sbjct: 558 QLMSLAKMGSIMYMVKITDHQNTEEQ-SYPDSIKQILLEYHDVFDEPSELPPERYCDHQI 616

Query: 278 PLKPDAKPFKLRPYRYPHSQKNKIEHQVKEMLQNGII 388
           PL   AKP  LRPY+Y    K++IE QVKEML +G+I
Sbjct: 617 PLIEGAKPVSLRPYKYNPELKDEIERQVKEMLDSGVI 653



 Score = 75.5 bits (184), Expect(2) = 3e-29
 Identities = 31/50 (62%), Positives = 42/50 (84%)
 Frame = +1

Query: 388 QPSNSPFASPVLIVKKKDETWRFCVDYRYLNAMTIKDSFPIPNIDELLDK 537
           QPS S ++SP L+V+KKD TWR CVDYR+LNA+T+K  +P+P I+ELLD+
Sbjct: 654 QPSQSAWSSPALLVRKKDGTWRLCVDYRHLNALTVKSKYPVPIIEELLDE 703


>gb|ABA95339.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1348

 Score = 82.4 bits (202), Expect(2) = 3e-29
 Identities = 46/98 (46%), Positives = 61/98 (62%), Gaps = 1/98 (1%)
 Frame = +2

Query: 98  QLLANTKAESSSYNLFAAITEGCGEQ-VSIPCEVSQLLSEFSDVFAIPKTLPPTRTLDHH 274
           QL+   K  S  Y +   +TEG  E+  ++P  V ++L EF+ VFA P+ LPPTR  DH 
Sbjct: 443 QLMGMAKLGSIMYMI--QLTEGRPEEHQNVPAPVQKILQEFAGVFAEPRGLPPTRYCDHR 500

Query: 275 IPLKPDAKPFKLRPYRYPHSQKNKIEHQVKEMLQNGII 388
           IPL   A+P  LRPYRY    K++IE QV EML +G+I
Sbjct: 501 IPLIEGAQPVNLRPYRYNPELKDEIERQVAEMLSSGVI 538



 Score = 71.2 bits (173), Expect(2) = 3e-29
 Identities = 31/50 (62%), Positives = 40/50 (80%)
 Frame = +1

Query: 388 QPSNSPFASPVLIVKKKDETWRFCVDYRYLNAMTIKDSFPIPNIDELLDK 537
           QPS S ++SP L+V+KK  TWR CVDYR+LNA+TIK  +P+P I ELLD+
Sbjct: 539 QPSQSTWSSPALLVRKKYGTWRLCVDYRHLNALTIKSKYPVPIIKELLDE 588


>emb|CAN83300.1| hypothetical protein VITISV_044100 [Vitis vinifera]
          Length = 1366

 Score = 77.4 bits (189), Expect(2) = 2e-28
 Identities = 38/71 (53%), Positives = 50/71 (70%)
 Frame = +2

Query: 194 VSQLLSEFSDVFAIPKTLPPTRTLDHHIPLKPDAKPFKLRPYRYPHSQKNKIEHQVKEML 373
           +  LL+ +S+VF+ PK LPPTR  DHHI L   AKP  + PYRYP+ QK+KIE+ V EML
Sbjct: 496 IYDLLNLYSEVFSEPKGLPPTRNHDHHIVLHSGAKPVCVGPYRYPYFQKSKIENIVHEML 555

Query: 374 QNGIINLATVP 406
           Q+GI+  +  P
Sbjct: 556 QSGIVRPSQSP 566



 Score = 73.6 bits (179), Expect(2) = 2e-28
 Identities = 33/50 (66%), Positives = 40/50 (80%)
 Frame = +1

Query: 388 QPSNSPFASPVLIVKKKDETWRFCVDYRYLNAMTIKDSFPIPNIDELLDK 537
           +PS SPF+SPVL+V+K D +WR CVDYR LN  TIK  FPIP +DELLD+
Sbjct: 561 RPSQSPFSSPVLLVRKHDGSWRLCVDYRALNKETIKVKFPIPIVDELLDE 610


>ref|XP_002443111.1| hypothetical protein SORBIDRAFT_08g008675 [Sorghum bicolor]
           gi|241943804|gb|EES16949.1| hypothetical protein
           SORBIDRAFT_08g008675 [Sorghum bicolor]
          Length = 1456

 Score = 77.4 bits (189), Expect(2) = 9e-28
 Identities = 33/48 (68%), Positives = 42/48 (87%)
 Frame = +1

Query: 394 SNSPFASPVLIVKKKDETWRFCVDYRYLNAMTIKDSFPIPNIDELLDK 537
           S+S F+SPVL+VKK D  WRFC+DYR LNA+T+KD+FPIP +DELLD+
Sbjct: 556 SDSAFSSPVLLVKKADSGWRFCIDYRALNALTVKDTFPIPVVDELLDE 603



 Score = 71.2 bits (173), Expect(2) = 9e-28
 Identities = 37/77 (48%), Positives = 47/77 (61%)
 Frame = +2

Query: 158 EGCGEQVSIPCEVSQLLSEFSDVFAIPKTLPPTRTLDHHIPLKPDAKPFKLRPYRYPHSQ 337
           E C    S P  +  LL+EF D+FA P  +PP R  DH I LK  A+P  +RPYRYP + 
Sbjct: 478 ETCATTSSAPL-LDALLAEFVDIFAEPHGMPPQRARDHAINLKAGAQPVAVRPYRYPAAH 536

Query: 338 KNKIEHQVKEMLQNGII 388
           K+++E Q   MLQ GII
Sbjct: 537 KDELEKQCATMLQQGII 553


>ref|XP_002448587.1| hypothetical protein SORBIDRAFT_06g029685 [Sorghum bicolor]
           gi|241939770|gb|EES12915.1| hypothetical protein
           SORBIDRAFT_06g029685 [Sorghum bicolor]
          Length = 797

 Score = 77.0 bits (188), Expect(2) = 1e-27
 Identities = 33/48 (68%), Positives = 42/48 (87%)
 Frame = +1

Query: 394 SNSPFASPVLIVKKKDETWRFCVDYRYLNAMTIKDSFPIPNIDELLDK 537
           S+S F+SPVL+VKK D  WRFC+DYR LNA+T+KD+FPIP +DELLD+
Sbjct: 615 SDSAFSSPVLLVKKADGGWRFCIDYRALNALTVKDAFPIPMVDELLDE 662



 Score = 71.2 bits (173), Expect(2) = 1e-27
 Identities = 37/77 (48%), Positives = 47/77 (61%)
 Frame = +2

Query: 158 EGCGEQVSIPCEVSQLLSEFSDVFAIPKTLPPTRTLDHHIPLKPDAKPFKLRPYRYPHSQ 337
           E C    S P  +  LL+EF D+FA P  +PP R  DH I LK  A+P  +RPYRYP + 
Sbjct: 537 ETCATTSSAPL-LDALLAEFVDIFAEPHGMPPQRARDHAINLKAGAQPVAVRPYRYPAAH 595

Query: 338 KNKIEHQVKEMLQNGII 388
           K+++E Q   MLQ GII
Sbjct: 596 KDELEKQCATMLQQGII 612


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