BLASTX nr result

ID: Cephaelis21_contig00048896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00048896
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulga...    58   7e-07
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    55   5e-06
emb|CCA66198.1| hypothetical protein [Beta vulgaris subsp. vulga...    55   6e-06
emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulga...    55   8e-06

>emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/86 (34%), Positives = 49/86 (56%)
 Frame = -2

Query: 281 GPRGFKFQKMWLNRAELVGVVHSSWEQPLWAREMLRVFLKLKRLKQVLRTWNHTVFGNVF 102
           GP+ F+FQ  WL+  E + +V + W+      E L    KLK +K+ L++WN T FGN+ 
Sbjct: 235 GPKPFRFQNCWLSDPECLKIVKAVWQDA----EALHTIGKLKEVKKRLKSWNLTEFGNID 290

Query: 101 SNV*RAEMEVKQAEDVFQQSNSTSDL 24
           S + + E E++  + +    N+T DL
Sbjct: 291 SKIKKFESEIQHLDSI----NNTRDL 312


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 31/90 (34%), Positives = 42/90 (46%)
 Frame = -2

Query: 287 SQGPRGFKFQKMWLNRAELVGVVHSSWEQPLWAREMLRVFLKLKRLKQVLRTWNHTVFGN 108
           SQ    FKF K W    +   +V  +W +      M R+  KLK +KQV R WN TVFG+
Sbjct: 241 SQRSGNFKFFKTWTEHEDCRRIVAENWSKHTRGHGMTRLQAKLKHMKQVFRHWNRTVFGD 300

Query: 107 VFSNV*RAEMEVKQAEDVFQQSNSTSDLVA 18
           V   V  A  EV + + +      +  L A
Sbjct: 301 VDRKVRMAVEEVNRIQQIIDSVGFSDQLYA 330


>emb|CCA66198.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 27/72 (37%), Positives = 43/72 (59%)
 Frame = -2

Query: 281 GPRGFKFQKMWLNRAELVGVVHSSWEQPLWAREMLRVFLKLKRLKQVLRTWNHTVFGNVF 102
           GPR FKFQ +WL+    + +V  +W Q     + L +  KLK++K  L+TWN   FGN+ 
Sbjct: 235 GPRPFKFQDVWLSHKGCMEIVEKAWIQS----KELTLMQKLKKVKLDLKTWNSESFGNID 290

Query: 101 SNV*RAEMEVKQ 66
           +N+   E E+++
Sbjct: 291 ANILLREAEIQK 302


>emb|CCA66235.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1380

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 26/84 (30%), Positives = 47/84 (55%)
 Frame = -2

Query: 281 GPRGFKFQKMWLNRAELVGVVHSSWEQPLWAREMLRVFLKLKRLKQVLRTWNHTVFGNVF 102
           GP+ FKFQ  WL+    + +V  +W++       + +  KLK +K+ L+ WN  VFGN+ 
Sbjct: 235 GPKPFKFQNCWLSDPRCMRLVKDTWQKS----SPMGLVQKLKTVKKDLKDWNEKVFGNIE 290

Query: 101 SNV*RAEMEVKQAEDVFQQSNSTS 30
           +N+ + E E+ Q + +  + +  S
Sbjct: 291 ANIKQLEHEINQLDKISNERDLDS 314


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