BLASTX nr result

ID: Cephaelis21_contig00048754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00048754
         (319 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625160.1| Pentatricopeptide repeat-containing protein ...   145   3e-33
ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat...   142   3e-32
ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   138   5e-31
ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat...   138   5e-31
ref|XP_002322703.1| predicted protein [Populus trichocarpa] gi|2...   138   5e-31

>ref|XP_003625160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124360204|gb|ABN08217.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355500175|gb|AES81378.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 596

 Score =  145 bits (367), Expect = 3e-33
 Identities = 69/106 (65%), Positives = 83/106 (78%)
 Frame = -1

Query: 319 GRAGKLQDALKIIEEMPIQPTESVWGALLTGCRIHGKTELAAYAADRILELGSVNSGFRV 140
           GRAGKL DA+K+IEEMP++PTESVWGALLTGCR+HG T+LA+Y ADR+ ELGSV+SG  V
Sbjct: 372 GRAGKLNDAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHV 431

Query: 139 LLSNVXXXXXXXXXXXXXXKKLRDLGVKKETGLSWVEEGNKVHTFA 2
           +LSN               K +RD G+KKETGLSWVEEGN++HTFA
Sbjct: 432 MLSNAYAAAGRWEEAAKARKMMRDRGIKKETGLSWVEEGNRIHTFA 477


>ref|XP_003553418.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Glycine max]
          Length = 582

 Score =  142 bits (358), Expect = 3e-32
 Identities = 67/106 (63%), Positives = 84/106 (79%)
 Frame = -1

Query: 319 GRAGKLQDALKIIEEMPIQPTESVWGALLTGCRIHGKTELAAYAADRILELGSVNSGFRV 140
           GRAGKL++A+ +I+EMP+QPTESVWGALLTGCRIHG TELA++ AD++ E+G+V+SG +V
Sbjct: 358 GRAGKLEEAVLVIKEMPMQPTESVWGALLTGCRIHGNTELASFVADKVFEMGAVSSGIQV 417

Query: 139 LLSNVXXXXXXXXXXXXXXKKLRDLGVKKETGLSWVEEGNKVHTFA 2
           LLSN               K +RD G+KKETGLSWVEEGN+VHTFA
Sbjct: 418 LLSNAYAAAGRWEEAARARKMMRDQGIKKETGLSWVEEGNRVHTFA 463


>ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score =  138 bits (347), Expect = 5e-31
 Identities = 69/105 (65%), Positives = 80/105 (76%)
 Frame = -1

Query: 319 GRAGKLQDALKIIEEMPIQPTESVWGALLTGCRIHGKTELAAYAADRILELGSVNSGFRV 140
           GRAGKLQ+A+ +I++MP++PTESVWGALLTGCRIH  TE+AA+ ADRILE+ S +SG  V
Sbjct: 374 GRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHV 433

Query: 139 LLSNVXXXXXXXXXXXXXXKKLRDLGVKKETGLSWVEEGNKVHTF 5
           LLSN               K LRD GVKKETGLSWVEEGNKVHTF
Sbjct: 434 LLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTF 478


>ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cucumis sativus]
          Length = 598

 Score =  138 bits (347), Expect = 5e-31
 Identities = 69/105 (65%), Positives = 80/105 (76%)
 Frame = -1

Query: 319 GRAGKLQDALKIIEEMPIQPTESVWGALLTGCRIHGKTELAAYAADRILELGSVNSGFRV 140
           GRAGKLQ+A+ +I++MP++PTESVWGALLTGCRIH  TE+AA+ ADRILE+ S +SG  V
Sbjct: 374 GRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHV 433

Query: 139 LLSNVXXXXXXXXXXXXXXKKLRDLGVKKETGLSWVEEGNKVHTF 5
           LLSN               K LRD GVKKETGLSWVEEGNKVHTF
Sbjct: 434 LLSNAYAAAGRYEEAARMRKMLRDRGVKKETGLSWVEEGNKVHTF 478


>ref|XP_002322703.1| predicted protein [Populus trichocarpa] gi|222867333|gb|EEF04464.1|
           predicted protein [Populus trichocarpa]
          Length = 627

 Score =  138 bits (347), Expect = 5e-31
 Identities = 66/106 (62%), Positives = 80/106 (75%)
 Frame = -1

Query: 319 GRAGKLQDALKIIEEMPIQPTESVWGALLTGCRIHGKTELAAYAADRILELGSVNSGFRV 140
           GRAGKLQ+AL +I+ MP +PTESVWGA +TGCRIHG T+LAA+AAD++ ELG+V+SG  V
Sbjct: 403 GRAGKLQEALSVIKGMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHV 462

Query: 139 LLSNVXXXXXXXXXXXXXXKKLRDLGVKKETGLSWVEEGNKVHTFA 2
           +LSN               K LRD GVKKETGLSW+EEGN+VH FA
Sbjct: 463 MLSNAYAAAGRYEDAAKARKMLRDRGVKKETGLSWIEEGNRVHKFA 508


Top