BLASTX nr result

ID: Cephaelis21_contig00048724 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00048724
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ric...   139   2e-31
ref|XP_002307047.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-31
emb|CBI37517.3| unnamed protein product [Vitis vinifera]              136   2e-30
ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis ...   136   2e-30
ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha [Glycin...   134   8e-30

>ref|XP_002527391.1| prokaryotic DNA topoisomerase, putative [Ricinus communis]
           gi|223533243|gb|EEF34998.1| prokaryotic DNA
           topoisomerase, putative [Ricinus communis]
          Length = 833

 Score =  139 bits (351), Expect = 2e-31
 Identities = 65/80 (81%), Positives = 73/80 (91%)
 Frame = +3

Query: 3   PTRFSNGESVWSWEHHKLYELVVRHFLACVSQPAKGAETTVEIDIAGEKFSASGRVILEK 182
           PT+FS GE+ WS +HH++YELVVRHFLACVSQPA GAETTVEIDIAGE+FSASGRVIL K
Sbjct: 397 PTKFSPGETGWSQDHHRVYELVVRHFLACVSQPAVGAETTVEIDIAGEQFSASGRVILAK 456

Query: 183 NYLDVYIFESWAGSLIPTYI 242
           NYLDVY FESW GS+IPTY+
Sbjct: 457 NYLDVYRFESWGGSMIPTYV 476


>ref|XP_002307047.1| predicted protein [Populus trichocarpa] gi|222856496|gb|EEE94043.1|
           predicted protein [Populus trichocarpa]
          Length = 910

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/80 (81%), Positives = 71/80 (88%)
 Frame = +3

Query: 3   PTRFSNGESVWSWEHHKLYELVVRHFLACVSQPAKGAETTVEIDIAGEKFSASGRVILEK 182
           PT+FS GES WS +HH+LYELVVRHFLACVSQPA GAET VEIDIAGE+FSASGRVIL K
Sbjct: 395 PTKFSAGESRWSQDHHRLYELVVRHFLACVSQPAVGAETVVEIDIAGERFSASGRVILAK 454

Query: 183 NYLDVYIFESWAGSLIPTYI 242
           NYLDVY FESW  S+IPTY+
Sbjct: 455 NYLDVYRFESWGDSMIPTYL 474


>emb|CBI37517.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  136 bits (343), Expect = 2e-30
 Identities = 64/81 (79%), Positives = 71/81 (87%)
 Frame = +3

Query: 3   PTRFSNGESVWSWEHHKLYELVVRHFLACVSQPAKGAETTVEIDIAGEKFSASGRVILEK 182
           PT+FS GES WS +H +LYELVVRHFLACVSQPA GAET VEIDIAGE FS+SGRVI+ K
Sbjct: 69  PTKFSAGESGWSQDHQRLYELVVRHFLACVSQPAVGAETIVEIDIAGESFSSSGRVIIAK 128

Query: 183 NYLDVYIFESWAGSLIPTYIF 245
           NYLDVY FESW GS+IPTY+F
Sbjct: 129 NYLDVYRFESWGGSMIPTYVF 149


>ref|XP_002264607.1| PREDICTED: DNA topoisomerase 3-alpha [Vitis vinifera]
          Length = 914

 Score =  136 bits (343), Expect = 2e-30
 Identities = 64/81 (79%), Positives = 71/81 (87%)
 Frame = +3

Query: 3   PTRFSNGESVWSWEHHKLYELVVRHFLACVSQPAKGAETTVEIDIAGEKFSASGRVILEK 182
           PT+FS GES WS +H +LYELVVRHFLACVSQPA GAET VEIDIAGE FS+SGRVI+ K
Sbjct: 394 PTKFSAGESGWSQDHQRLYELVVRHFLACVSQPAVGAETIVEIDIAGESFSSSGRVIIAK 453

Query: 183 NYLDVYIFESWAGSLIPTYIF 245
           NYLDVY FESW GS+IPTY+F
Sbjct: 454 NYLDVYRFESWGGSMIPTYVF 474


>ref|XP_003526873.1| PREDICTED: DNA topoisomerase 3-alpha [Glycine max]
          Length = 913

 Score =  134 bits (337), Expect = 8e-30
 Identities = 64/79 (81%), Positives = 70/79 (88%)
 Frame = +3

Query: 3   PTRFSNGESVWSWEHHKLYELVVRHFLACVSQPAKGAETTVEIDIAGEKFSASGRVILEK 182
           PT+FS GES WS +H KLYELVVRHFLACVS+PA GAETTVEI+IAGE FSA GRVILEK
Sbjct: 395 PTKFSTGESGWSQDHRKLYELVVRHFLACVSKPALGAETTVEINIAGELFSACGRVILEK 454

Query: 183 NYLDVYIFESWAGSLIPTY 239
           NYLDVY +ESW GS+IPTY
Sbjct: 455 NYLDVYRYESWGGSMIPTY 473


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