BLASTX nr result

ID: Cephaelis21_contig00048656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00048656
         (260 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD96948.1| hypothetical protein [Cleome spinosa]                   76   3e-12
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    74   1e-11
gb|AAK39575.1|AC025296_10 putative reverse transcriptase [Oryza ...    72   5e-11
ref|NP_001173091.1| Os02g0636500 [Oryza sativa Japonica Group] g...    72   6e-11
gb|EEE57442.1| hypothetical protein OsJ_07651 [Oryza sativa Japo...    72   6e-11

>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
          Length = 539

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 38/82 (46%), Positives = 56/82 (68%)
 Frame = +2

Query: 14  ISGFFQASRGLKQGDPLSPLLFILLTEAMSRDLKQLVAQGKVEPFSLPRWAPIVTHLCFA 193
           ++G+F+  RGL+QGDPLSP LFI+  E +SR L +  A+ ++        +P++THL FA
Sbjct: 93  LAGYFKGRRGLRQGDPLSPYLFIMSMEVLSRMLDRCAAESRLS-LHPKCHSPVITHLAFA 151

Query: 194 DDLIIFTRGNHRSLKELKVFLE 259
           DD++IFT G  RSL E+K  L+
Sbjct: 152 DDIMIFTSGETRSLLEVKNTLD 173


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease
           H; Endonuclease/exonuclease/phosphatase [Medicago
           truncatula]
          Length = 1246

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/79 (45%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
 Frame = +2

Query: 20  GFFQASRGLKQGDPLSPLLFILLTEAMSRDLKQLVAQGKVEPFSLPRWAPIVTHLCFADD 199
           GFF  S G++QGDPLSPLLF L+ E +SR L      G++ P S  R     TH+ +ADD
Sbjct: 637 GFFTCSHGVRQGDPLSPLLFCLVEEVLSRALSMAATDGQLIPMSYCRGVSFPTHILYADD 696

Query: 200 LIIFTRGNHRSLKEL-KVF 253
           ++IF  G  R+++ L K+F
Sbjct: 697 VLIFCTGTKRNIRRLIKIF 715


>gb|AAK39575.1|AC025296_10 putative reverse transcriptase [Oryza sativa Japonica Group]
           gi|31433076|gb|AAP54636.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 791

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 34/77 (44%), Positives = 51/77 (66%)
 Frame = +2

Query: 26  FQASRGLKQGDPLSPLLFILLTEAMSRDLKQLVAQGKVEPFSLPRWAPIVTHLCFADDLI 205
           F  +RGL+QGDPLSP LF+ + + +S  LK+ VAQ  + PF + R AP ++HL FADD +
Sbjct: 37  FAPTRGLRQGDPLSPFLFLFVADGLSLLLKEKVAQNSLTPFKVCRAAPGISHLLFADDTL 96

Query: 206 IFTRGNHRSLKELKVFL 256
           +F + + R  + +K  L
Sbjct: 97  LFFKAHQREAEVVKEVL 113


>ref|NP_001173091.1| Os02g0636500 [Oryza sativa Japonica Group]
           gi|255671119|dbj|BAH91820.1| Os02g0636500 [Oryza sativa
           Japonica Group]
          Length = 625

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/66 (50%), Positives = 47/66 (71%)
 Frame = +2

Query: 26  FQASRGLKQGDPLSPLLFILLTEAMSRDLKQLVAQGKVEPFSLPRWAPIVTHLCFADDLI 205
           F  SRGL+QGDPLSP LF+ + + MS  L++ VAQG++ P  + R AP ++HL FADD +
Sbjct: 189 FAQSRGLRQGDPLSPFLFLFVADGMSLLLEEKVAQGELSPVYVCRRAPCISHLLFADDTL 248

Query: 206 IFTRGN 223
           +F + N
Sbjct: 249 LFFKAN 254


>gb|EEE57442.1| hypothetical protein OsJ_07651 [Oryza sativa Japonica Group]
          Length = 946

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 33/66 (50%), Positives = 47/66 (71%)
 Frame = +2

Query: 26  FQASRGLKQGDPLSPLLFILLTEAMSRDLKQLVAQGKVEPFSLPRWAPIVTHLCFADDLI 205
           F  SRGL+QGDPLSP LF+ + + MS  L++ VAQG++ P  + R AP ++HL FADD +
Sbjct: 193 FAQSRGLRQGDPLSPFLFLFVADGMSLLLEEKVAQGELSPVYVCRRAPCISHLLFADDTL 252

Query: 206 IFTRGN 223
           +F + N
Sbjct: 253 LFFKAN 258


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