BLASTX nr result

ID: Cephaelis21_contig00048577 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00048577
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containi...    99   7e-19
emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]    99   7e-19
ref|XP_003553254.1| PREDICTED: pentatricopeptide repeat-containi...    84   2e-14
ref|XP_003576051.1| PREDICTED: pentatricopeptide repeat-containi...    80   3e-13
ref|NP_001176541.1| Os11g0483950 [Oryza sativa Japonica Group] g...    80   3e-13

>ref|XP_002273841.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 474

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 45/54 (83%), Positives = 50/54 (92%)
 Frame = -1

Query: 574 RVGKEILALDPHNHGVYVVLSNMYAEAGKWEDVSKLRKVMKEGSLRKTPGWSLV 413
           RV KEIL L+PHNHGVYVVLSNMYAEAG+WEDV +LRKVMK G+L+KTPGWSLV
Sbjct: 417 RVVKEILVLEPHNHGVYVVLSNMYAEAGRWEDVLRLRKVMKSGNLKKTPGWSLV 470


>emb|CAN70049.1| hypothetical protein VITISV_013371 [Vitis vinifera]
          Length = 476

 Score = 98.6 bits (244), Expect = 7e-19
 Identities = 45/54 (83%), Positives = 50/54 (92%)
 Frame = -1

Query: 574 RVGKEILALDPHNHGVYVVLSNMYAEAGKWEDVSKLRKVMKEGSLRKTPGWSLV 413
           RV KEIL L+PHNHGVYVVLSNMYAEAG+WEDV +LRKVMK G+L+KTPGWSLV
Sbjct: 419 RVVKEILVLEPHNHGVYVVLSNMYAEAGRWEDVLRLRKVMKSGNLKKTPGWSLV 472


>ref|XP_003553254.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 465

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 38/54 (70%), Positives = 46/54 (85%)
 Frame = -1

Query: 574 RVGKEILALDPHNHGVYVVLSNMYAEAGKWEDVSKLRKVMKEGSLRKTPGWSLV 413
           RV K+ILAL+P NHGV+V LSNMYAEAG+W++V +LRK MKE  L+K PGWSLV
Sbjct: 410 RVVKDILALEPQNHGVHVALSNMYAEAGQWQEVLRLRKTMKEERLKKAPGWSLV 463


>ref|XP_003576051.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Brachypodium distachyon]
          Length = 468

 Score = 80.1 bits (196), Expect = 3e-13
 Identities = 38/56 (67%), Positives = 43/56 (76%)
 Frame = -1

Query: 574 RVGKEILALDPHNHGVYVVLSNMYAEAGKWEDVSKLRKVMKEGSLRKTPGWSLVGG 407
           R   EIL LDP NHGVYVVLSN+YA+AG+W+DV +LRKVMK   L K PG S VGG
Sbjct: 409 RTALEILKLDPENHGVYVVLSNIYADAGRWQDVDRLRKVMKGALLSKIPGSSAVGG 464


>ref|NP_001176541.1| Os11g0483950 [Oryza sativa Japonica Group]
           gi|77550893|gb|ABA93690.1| pentatricopeptide
           repeat-containing protein, putative [Oryza sativa
           Japonica Group] gi|125577152|gb|EAZ18374.1| hypothetical
           protein OsJ_33904 [Oryza sativa Japonica Group]
           gi|255680094|dbj|BAH95269.1| Os11g0483950 [Oryza sativa
           Japonica Group]
          Length = 478

 Score = 79.7 bits (195), Expect = 3e-13
 Identities = 38/56 (67%), Positives = 43/56 (76%)
 Frame = -1

Query: 574 RVGKEILALDPHNHGVYVVLSNMYAEAGKWEDVSKLRKVMKEGSLRKTPGWSLVGG 407
           R  +E+L LDP NHGVYVVLSNMYAEAG+W+DV +LRKVMK   L K PG S V G
Sbjct: 420 RAVQEMLKLDPGNHGVYVVLSNMYAEAGRWQDVDRLRKVMKRARLSKIPGSSTVAG 475