BLASTX nr result

ID: Cephaelis21_contig00048529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00048529
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_052806.1| hypothetical protein OrniCp080 [Oryza nivara] g...    77   1e-12
prf||1603356CM trnA intron ORF 109                                     77   1e-12
ref|NP_043080.1| hypothetical protein ZemaCp157 [Zea mays] gi|11...    71   7e-11
gb|ABP35455.1| ORF43n [Pinus koraiensis]                               66   3e-09

>ref|YP_052806.1| hypothetical protein OrniCp080 [Oryza nivara]
           gi|50234049|ref|YP_052826.1| hypothetical protein
           OrniCp100 [Oryza nivara] gi|82517|pir||JQ0280
           hypothetical 12K protein (trnA intron) - rice
           chloroplast gi|49615053|dbj|BAD26836.1| unnamed protein
           product [Oryza nivara] gi|49615073|dbj|BAD26856.1|
           unnamed protein product [Oryza nivara]
          Length = 109

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 46/76 (60%), Positives = 48/76 (63%)
 Frame = -1

Query: 266 KSRAEKGGKLXXXXXXXXXXXGTTRILS*NGIPT*HLLSEILRRVALWRAQYDESCKLCS 87
           K    K G+L           GTTRIL   G        EILRRVALWRAQYDESCKLCS
Sbjct: 33  KESGGKRGELPVPGSPVAGFPGTTRILR-MGFQLSTFCFEILRRVALWRAQYDESCKLCS 91

Query: 86  GGSYCLSLASMVK*VG 39
           GGSYCLSLASMV+ VG
Sbjct: 92  GGSYCLSLASMVEPVG 107


>prf||1603356CM trnA intron ORF 109
          Length = 109

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 46/76 (60%), Positives = 48/76 (63%)
 Frame = -1

Query: 266 KSRAEKGGKLXXXXXXXXXXXGTTRILS*NGIPT*HLLSEILRRVALWRAQYDESCKLCS 87
           K    K G+L           GTTRIL   G        EILRRVALWRAQYDESCKLCS
Sbjct: 33  KESGGKRGELPVPGSPVAGFPGTTRILR-MGFQLSTFCFEILRRVALWRAQYDESCKLCS 91

Query: 86  GGSYCLSLASMVK*VG 39
           GGSYCLSLASMV+ VG
Sbjct: 92  GGSYCLSLASMVEPVG 107


>ref|NP_043080.1| hypothetical protein ZemaCp157 [Zea mays]
           gi|11467265|ref|NP_043097.1| hypothetical protein
           ZemaCp158 [Zea mays] gi|48478724|ref|YP_024331.1|
           hypothetical protein 49 [Saccharum hybrid cultivar
           SP-80-3280] gi|48478741|ref|YP_024348.1| hypothetical
           protein 49 [Saccharum hybrid cultivar SP-80-3280]
           gi|50812587|ref|YP_054688.1| hypothetical protein
           SaofCp082 [Saccharum hybrid cultivar NCo 310]
           gi|50812604|ref|YP_054705.1| hypothetical protein
           SaofCp099 [Saccharum hybrid cultivar NCo 310]
           gi|260677395|ref|YP_003208243.1| hypothetical protein
           ColajoC_p081 [Coix lacryma-jobi]
           gi|260677398|ref|YP_003208258.1| hypothetical protein
           ColajoC_p096 [Coix lacryma-jobi]
           gi|902277|emb|CAA60342.1| hypothetical protein [Zea
           mays] gi|902294|emb|CAA60358.1| hypothetical protein
           [Zea mays] gi|19743726|gb|AAL92455.1| hypothetical
           protein [Saccharum hybrid cultivar SP80-3280]
           gi|48478626|gb|AAT44646.1| hypothetical protein 49
           [Saccharum hybrid cultivar SP80-3280]
           gi|48478643|gb|AAT44663.1| hypothetical protein 49
           [Saccharum hybrid cultivar SP80-3280]
           gi|49659571|dbj|BAD27352.1| hypothetical protein
           [Saccharum hybrid cultivar NCo 310]
           gi|49659588|dbj|BAD27369.1| hypothetical protein
           [Saccharum hybrid cultivar NCo 310]
           gi|209361333|gb|ACI43248.1| unknown [Coix lacryma-jobi]
           gi|209361336|gb|ACI43251.1| unknown [Coix lacryma-jobi]
          Length = 49

 Score = 71.2 bits (173), Expect(2) = 7e-11
 Identities = 33/36 (91%), Positives = 35/36 (97%)
 Frame = -1

Query: 146 ILRRVALWRAQYDESCKLCSGGSYCLSLASMVK*VG 39
           ILRRVALWRAQYDESCKLCSGGSYCLSL+SMV+ VG
Sbjct: 12  ILRRVALWRAQYDESCKLCSGGSYCLSLSSMVEPVG 47



 Score = 20.4 bits (41), Expect(2) = 7e-11
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = -2

Query: 178 MGFQLSTF 155
           MGFQLSTF
Sbjct: 1   MGFQLSTF 8


>gb|ABP35455.1| ORF43n [Pinus koraiensis]
          Length = 43

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/33 (90%), Positives = 32/33 (96%)
 Frame = -1

Query: 137 RVALWRAQYDESCKLCSGGSYCLSLASMVK*VG 39
           RVALWRAQYDESC+LCSGGSYCLSLASMV+ VG
Sbjct: 9   RVALWRAQYDESCELCSGGSYCLSLASMVESVG 41


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