BLASTX nr result

ID: Cephaelis21_contig00048524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00048524
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vini...   132   4e-29
ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucum...   117   1e-24
ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, put...   117   1e-24
ref|XP_002332533.1| predicted protein [Populus trichocarpa] gi|2...   114   1e-23
dbj|BAB92553.1| DNA cross-link repair 1B-like protein [Oryza sat...   102   3e-20

>ref|XP_002272846.1| PREDICTED: 5' exonuclease Apollo [Vitis vinifera]
           gi|296081253|emb|CBI17997.3| unnamed protein product
           [Vitis vinifera]
          Length = 435

 Score =  132 bits (331), Expect = 4e-29
 Identities = 64/96 (66%), Positives = 71/96 (73%)
 Frame = -3

Query: 290 SSGDPVTIQVMAIDAHHCPGAVMYLFHGEFGCMLCTGDFRWENKNPRAQIARSMLLEAXX 111
           SSG   T+ VMAIDAHHCPGAVMYLF G+FGCML TGDFRWE  N RA+I R+MLL A  
Sbjct: 79  SSGSETTVDVMAIDAHHCPGAVMYLFRGDFGCMLFTGDFRWEATNERAKIGRTMLLHALE 138

Query: 110 XXXXXXXXXDNTYCNPSFCFPSREVAAKQIVNIINS 3
                    DNTYCNPSF FPSRE AA+Q+V+II S
Sbjct: 139 GDRVNILYLDNTYCNPSFSFPSREAAAQQVVDIIAS 174


>ref|XP_004144572.1| PREDICTED: 5' exonuclease Apollo-like [Cucumis sativus]
           gi|449493187|ref|XP_004159216.1| PREDICTED: 5'
           exonuclease Apollo-like [Cucumis sativus]
          Length = 428

 Score =  117 bits (292), Expect = 1e-24
 Identities = 58/96 (60%), Positives = 67/96 (69%)
 Frame = -3

Query: 290 SSGDPVTIQVMAIDAHHCPGAVMYLFHGEFGCMLCTGDFRWENKNPRAQIARSMLLEAXX 111
           SSG    I+V+AIDAHHCPGAVM LF G+FGC+L TGDFRWE  + RA   R  LL A  
Sbjct: 79  SSGSRKVIKVVAIDAHHCPGAVMLLFRGDFGCLLYTGDFRWEMSSERANKGRIALLNALE 138

Query: 110 XXXXXXXXXDNTYCNPSFCFPSREVAAKQIVNIINS 3
                    DNTYCNPS+ FPSRE+AA+QIV+II S
Sbjct: 139 DNTVDVLYLDNTYCNPSYAFPSREIAARQIVDIIAS 174


>ref|XP_002522720.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus
           communis] gi|223538070|gb|EEF39682.1| DNA cross-link
           repair protein pso2/snm1, putative [Ricinus communis]
          Length = 427

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/96 (59%), Positives = 66/96 (68%)
 Frame = -3

Query: 290 SSGDPVTIQVMAIDAHHCPGAVMYLFHGEFGCMLCTGDFRWENKNPRAQIARSMLLEAXX 111
           SSG    +QVM IDAHHCPGAVM LF G+FGC+L TGDFRWE  + R +I  +MLL A  
Sbjct: 79  SSGSQTVLQVMPIDAHHCPGAVMLLFRGDFGCLLYTGDFRWEATSERGKIGSNMLLNALK 138

Query: 110 XXXXXXXXXDNTYCNPSFCFPSREVAAKQIVNIINS 3
                    DNTYCNPSF FP R VAA+Q+V+II S
Sbjct: 139 DDSVDILYLDNTYCNPSFDFPPRHVAARQVVDIIAS 174


>ref|XP_002332533.1| predicted protein [Populus trichocarpa] gi|222832669|gb|EEE71146.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score =  114 bits (284), Expect = 1e-23
 Identities = 53/96 (55%), Positives = 68/96 (70%)
 Frame = -3

Query: 290 SSGDPVTIQVMAIDAHHCPGAVMYLFHGEFGCMLCTGDFRWENKNPRAQIARSMLLEAXX 111
           ++G  +T  VMA+D HHCPG VM+LF GEFGC++ TGDF+WE  + RA+ ARS LL    
Sbjct: 72  TTGSQITAHVMALDTHHCPGVVMFLFRGEFGCLMYTGDFQWEVDSKRAKDARSRLLNVLK 131

Query: 110 XXXXXXXXXDNTYCNPSFCFPSREVAAKQIVNIINS 3
                    DNTYCNPS+ FP+REVAA+Q+V+II S
Sbjct: 132 NETVDVLYLDNTYCNPSYDFPTREVAAQQVVDIIAS 167


>dbj|BAB92553.1| DNA cross-link repair 1B-like protein [Oryza sativa Japonica Group]
           gi|125572255|gb|EAZ13770.1| hypothetical protein
           OsJ_03695 [Oryza sativa Japonica Group]
          Length = 416

 Score =  102 bits (254), Expect = 3e-20
 Identities = 50/96 (52%), Positives = 64/96 (66%)
 Frame = -3

Query: 290 SSGDPVTIQVMAIDAHHCPGAVMYLFHGEFGCMLCTGDFRWENKNPRAQIARSMLLEAXX 111
           S+G  V++ V AI A HCPG++MYLF G+ GCML TGDFRWE +  RA+ A+  LL+A  
Sbjct: 81  STGRAVSVVVTAIPALHCPGSLMYLFRGDLGCMLYTGDFRWELRCKRARAAKKALLDALA 140

Query: 110 XXXXXXXXXDNTYCNPSFCFPSREVAAKQIVNIINS 3
                    DNTYC+PS  FP R + A+QIVNII +
Sbjct: 141 GDTVDVLYLDNTYCHPSLSFPPRPIVAEQIVNIIRA 176


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