BLASTX nr result
ID: Cephaelis21_contig00048333
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cephaelis21_contig00048333 (226 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004160739.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin... 94 1e-17 ref|XP_004138388.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH... 94 1e-17 gb|AFU82534.1| DNA-dependent ATPase, partial [Artemisia tridentata] 91 1e-16 ref|XP_002329202.1| chromatin remodeling complex subunit [Populu... 89 4e-16 ref|XP_002520888.1| snf2 histone linker phd ring helicase, putat... 89 5e-16 >ref|XP_004160739.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase SHPRH-like [Cucumis sativus] Length = 1520 Score = 94.0 bits (232), Expect = 1e-17 Identities = 46/68 (67%), Positives = 50/68 (73%) Frame = -3 Query: 218 DQRPASRKQARFDVGGFYEAIRPSKEEPMLDVHLPELLPKLRPYQRRAAYWMIQREKGAS 39 D SRK A FD GFY+AI+PSK+EPMLD +P LLPKLRPYQRRAAYWMIQREKG S Sbjct: 252 DDTSNSRKHANFDTIGFYDAIKPSKDEPMLDEDIPNLLPKLRPYQRRAAYWMIQREKGFS 311 Query: 38 TCSASERN 15 S N Sbjct: 312 GNSGLGEN 319 >ref|XP_004138388.1| PREDICTED: E3 ubiquitin-protein ligase SHPRH-like [Cucumis sativus] Length = 1520 Score = 94.0 bits (232), Expect = 1e-17 Identities = 46/68 (67%), Positives = 50/68 (73%) Frame = -3 Query: 218 DQRPASRKQARFDVGGFYEAIRPSKEEPMLDVHLPELLPKLRPYQRRAAYWMIQREKGAS 39 D SRK A FD GFY+AI+PSK+EPMLD +P LLPKLRPYQRRAAYWMIQREKG S Sbjct: 252 DDTSNSRKHANFDTIGFYDAIKPSKDEPMLDEDIPNLLPKLRPYQRRAAYWMIQREKGFS 311 Query: 38 TCSASERN 15 S N Sbjct: 312 GNSGLGEN 319 >gb|AFU82534.1| DNA-dependent ATPase, partial [Artemisia tridentata] Length = 163 Score = 90.5 bits (223), Expect = 1e-16 Identities = 42/72 (58%), Positives = 58/72 (80%), Gaps = 1/72 (1%) Frame = -3 Query: 224 EEDQRPASRKQARFDVGGFYEAIRPSKEEPMLDVHLPELLPKLRPYQRRAAYWMIQREKG 45 ++++ P RK+ARFDV GFYEAI+PSK++ ML +P+LLP+LRPYQ+RAA+WM+QREKG Sbjct: 92 KDEESPDCRKRARFDVSGFYEAIKPSKDKQMLIDDMPDLLPELRPYQKRAAFWMVQREKG 151 Query: 44 A-STCSASERNQ 12 A S S+ +Q Sbjct: 152 ALEHLSGSQHSQ 163 >ref|XP_002329202.1| chromatin remodeling complex subunit [Populus trichocarpa] gi|222870983|gb|EEF08114.1| chromatin remodeling complex subunit [Populus trichocarpa] Length = 1320 Score = 89.0 bits (219), Expect = 4e-16 Identities = 43/69 (62%), Positives = 54/69 (78%) Frame = -3 Query: 218 DQRPASRKQARFDVGGFYEAIRPSKEEPMLDVHLPELLPKLRPYQRRAAYWMIQREKGAS 39 D S K+A+FDV G YEAI+PSK +PML+ LP+LLP LRPYQRRAA+WM+Q+EKG S Sbjct: 255 DDTSNSGKRAQFDVAGLYEAIKPSKSDPMLEDDLPDLLPTLRPYQRRAAHWMVQQEKGES 314 Query: 38 TCSASERNQ 12 + S ER+Q Sbjct: 315 S-SVKERSQ 322 >ref|XP_002520888.1| snf2 histone linker phd ring helicase, putative [Ricinus communis] gi|223540019|gb|EEF41597.1| snf2 histone linker phd ring helicase, putative [Ricinus communis] Length = 1588 Score = 88.6 bits (218), Expect = 5e-16 Identities = 44/65 (67%), Positives = 52/65 (80%), Gaps = 1/65 (1%) Frame = -3 Query: 203 SRKQARFDVGGFYEAIRPSKEEPMLDVHLPELLPKLRPYQRRAAYWMIQREKGASTCS-A 27 SRK+ RFDV GFYEAI+PSK P+L+ LP+LLP LRPYQRRAAYWM+Q+EKG S S Sbjct: 251 SRKRPRFDVAGFYEAIKPSKSSPILNDDLPDLLPVLRPYQRRAAYWMLQQEKGHSRDSIE 310 Query: 26 SERNQ 12 ER+Q Sbjct: 311 KERSQ 315