BLASTX nr result

ID: Cephaelis21_contig00048138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00048138
         (471 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulga...    59   5e-07
gb|ABI34321.1| RNase H family protein [Solanum demissum]               59   5e-07

>emb|CCA66178.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1381

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 4/139 (2%)
 Frame = -3

Query: 466  MWLNFLPKKISFFMSNLWRRKISIDEALLKLRF-HGP-SICPCYRTDGETFQHLFVTGPR 293
            +W+  +P +I  F+      KI+  + L  L   HG  +ICP   T+ ET +HL +  P 
Sbjct: 1050 VWVGLVPHRIELFVWLALLGKINTRDKLASLGIIHGDCNICPLCMTEPETAEHLLLHCPV 1109

Query: 292  TSQVWNFFQGSLGLTDHYN-SIRVRCTFW-WSQTTRNPILRSVFLLVPSVTCWFLWRTRI 119
             SQ+W+++ G   +   +  S+R   T W W +   +P  + V+  V  +  W LW+ R 
Sbjct: 1110 ASQIWSWWIGLWRIKWAFPLSLREAFTQWFWPK--NSPFFKKVWSAVFFIIVWTLWKER- 1166

Query: 118  DNRYNSSNPSAFSIISNII 62
            + R  S+NPS   ++ +++
Sbjct: 1167 NQRIFSNNPSTVKVLKDMV 1185


>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 2/151 (1%)
 Frame = -3

Query: 469  KMWLNFLPKKISFFMSNLWRRKISIDEALLKLRFHGPSICPCYRT-DGETFQHLFVTGPR 293
            K+W    P K+SF    L + K+   + + K   +  S C C +    ET  H+F+    
Sbjct: 569  KIWHGKFPFKMSFLTWRLVQNKLPFYDTVGKFVDNIDSNCVCCKNMKTETINHVFLNSDV 628

Query: 292  TSQVWNFFQGSLGLTDHYNSIRVRCTFWWSQTTRNPILRSVFLLVPSVTCWFLWRTRIDN 113
             S +W  F G+LG+    +S       WW+  T N I   +   +P +  W +W+ R   
Sbjct: 629  ASYLWKKFGGTLGIDTRASSTINLLKTWWNVQTHNSIHNVIIHTLPILIFWEIWKRRCAC 688

Query: 112  RYNSSNPSAFSIISNIIKFVIS-CIQLEFPN 23
            +Y       +  + N + + +   +++ FP+
Sbjct: 689  KYGDQKKMWYRTMENHVWWNLKMSLRMTFPS 719