BLASTX nr result

ID: Cephaelis21_contig00048065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00048065
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containi...   108   4e-22
ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containi...   108   4e-22
ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containi...   102   2e-20
emb|CBI25911.3| unnamed protein product [Vitis vinifera]              102   2e-20

>ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
           gi|449484855|ref|XP_004156999.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  108 bits (270), Expect = 4e-22
 Identities = 52/72 (72%), Positives = 53/72 (73%)
 Frame = -1

Query: 280 LFYHSEKLAVAFGIIATPPGTPIKVFKNLRTCGDCHTAIKFXXXXXXXXXXXXXSTRFHY 101
           L YHSEKLAVAFGII+TP GTPIKVFKNLRTC DCH AIKF             S RFH 
Sbjct: 653 LSYHSEKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHC 712

Query: 100 FEGGSCSCKDYW 65
           FEGGSCSCKDYW
Sbjct: 713 FEGGSCSCKDYW 724


>ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  108 bits (270), Expect = 4e-22
 Identities = 51/72 (70%), Positives = 53/72 (73%)
 Frame = -1

Query: 280 LFYHSEKLAVAFGIIATPPGTPIKVFKNLRTCGDCHTAIKFXXXXXXXXXXXXXSTRFHY 101
           L YHSEKLAV FGII+TPPGTPIKVFKNLRTC DCHTAIK+             S RFH 
Sbjct: 622 LVYHSEKLAVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHC 681

Query: 100 FEGGSCSCKDYW 65
           FE GSCSCKDYW
Sbjct: 682 FEDGSCSCKDYW 693


>ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|222867101|gb|EEF04232.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score =  106 bits (265), Expect = 2e-21
 Identities = 50/72 (69%), Positives = 53/72 (73%)
 Frame = -1

Query: 280 LFYHSEKLAVAFGIIATPPGTPIKVFKNLRTCGDCHTAIKFXXXXXXXXXXXXXSTRFHY 101
           L YHSEKLAVAFGII+TP GTPIKVFKNLRTC DCHTAIKF             S RFH+
Sbjct: 605 LSYHSEKLAVAFGIISTPEGTPIKVFKNLRTCVDCHTAIKFISKITNRKIIVRDSNRFHF 664

Query: 100 FEGGSCSCKDYW 65
           FE G CSC+DYW
Sbjct: 665 FEDGHCSCRDYW 676


>ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like, partial [Vitis vinifera]
          Length = 287

 Score =  102 bits (255), Expect = 2e-20
 Identities = 50/72 (69%), Positives = 52/72 (72%)
 Frame = -1

Query: 280 LFYHSEKLAVAFGIIATPPGTPIKVFKNLRTCGDCHTAIKFXXXXXXXXXXXXXSTRFHY 101
           L YHSEKLAVAFGII+TP GT IKVFKNLRTC DCHTAIKF             S RFH 
Sbjct: 216 LSYHSEKLAVAFGIISTPAGTLIKVFKNLRTCVDCHTAIKFISKIAKRKIIVRDSNRFHC 275

Query: 100 FEGGSCSCKDYW 65
           FE GSCSC+DYW
Sbjct: 276 FEDGSCSCRDYW 287


>emb|CBI25911.3| unnamed protein product [Vitis vinifera]
          Length = 288

 Score =  102 bits (255), Expect = 2e-20
 Identities = 50/72 (69%), Positives = 52/72 (72%)
 Frame = -1

Query: 280 LFYHSEKLAVAFGIIATPPGTPIKVFKNLRTCGDCHTAIKFXXXXXXXXXXXXXSTRFHY 101
           L YHSEKLAVAFGII+TP GT IKVFKNLRTC DCHTAIKF             S RFH 
Sbjct: 217 LSYHSEKLAVAFGIISTPAGTLIKVFKNLRTCVDCHTAIKFISKIAKRKIIVRDSNRFHC 276

Query: 100 FEGGSCSCKDYW 65
           FE GSCSC+DYW
Sbjct: 277 FEDGSCSCRDYW 288


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