BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00048029
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW1...    86   4e-15
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...    85   7e-15
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    84   2e-14
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...    83   2e-14
emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulga...    82   3e-14

>pir||S65812 RNA-directed DNA polymerase (EC 2.7.7.49) (clone DW15) -
           Arabidopsis thaliana retrotransposon Ta11-1
           gi|976278|gb|AAA75254.1| reverse transcriptase
           [Arabidopsis thaliana]
          Length = 1333

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 41/128 (32%), Positives = 70/128 (54%)
 Frame = -2

Query: 434 GDLNDILDVSEKRGGTTREESSYRQFREFITSMNMVQIKHLGDSWTWANNRENEGFVEEQ 255
           GD N IL   EKRGG  R +SS+  F + + S +M+++  +G+ +TW   + NE +++ +
Sbjct: 137 GDFNPILHNGEKRGGPRRGDSSFLPFTDMLDSCDMLELPSIGNPFTWGG-KTNEMWIQSR 195

Query: 254 LDRFFASPDWLYAYPMAIVHHFRKQSSDHSLLMLEVQPPAQPPSSRFYFDKRFLALPGVE 75
           LDR F + +W   +P++      K+ SDH  +++ +    +     F FDKR    P V+
Sbjct: 196 LDRCFGNKNWFRFFPISNQEFLDKRGSDHRPVLVRLTKTKEEYRGNFRFDKRLFNQPNVK 255

Query: 74  DVIQTIWN 51
           + I   WN
Sbjct: 256 ETIVQAWN 263


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
           gi|7267666|emb|CAB78094.1| RNA-directed DNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 43/140 (30%), Positives = 72/140 (51%)
 Frame = -2

Query: 434 GDLNDILDVSEKRGGTTREESSYRQFREFITSMNMVQIKHLGDSWTWANNRENEGFVEEQ 255
           GD NDILD SEK+GG  R E  +  FR F++   +  I H G+S +W   R +  F++ +
Sbjct: 79  GDFNDILDNSEKQGGPLRWEGFFLAFRSFVSQNGLWDINHTGNSLSWRGTRYSH-FIKSR 137

Query: 254 LDRFFASPDWLYAYPMAIVHHFRKQSSDHSLLMLEVQPPAQPPSSRFYFDKRFLALPGVE 75
           LDR   +  W   +PM+   + R + SDH  L+     P    S  F FD+R      + 
Sbjct: 138 LDRALGNCSWSELFPMSKCEYLRFEGSDHRPLVTYFGAPPLKRSKPFRFDRRLREKEEIR 197

Query: 74  DVIQTIWNKPLQGTPMFQLA 15
            +++ +W    Q + +++++
Sbjct: 198 ALVKEVWELARQDSVLYKIS 217


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 43/129 (33%), Positives = 74/129 (57%)
 Frame = -2

Query: 434 GDLNDILDVSEKRGGTTREESSYRQFREFITSMNMVQIKHLGDSWTWANNRENEGFVEEQ 255
           GD N+++D SEK GG  R+ESS  +FR+ + S  + ++ H G  ++W  NR N+  V+ +
Sbjct: 135 GDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEVNHSGYQFSWYGNR-NDELVQCR 193

Query: 254 LDRFFASPDWLYAYPMAIVHHFRKQSSDHSLLMLEVQPPAQPPSSRFYFDKRFLALPGVE 75
           LDR  A+  W+  +P A   + +K  SDHS L+  +        + F +DKR++   G +
Sbjct: 194 LDRTVANQAWMELFPQAKATYLQKICSDHSPLINNLVGDNWRKWAGFKYDKRWVQREGFK 253

Query: 74  DVIQTIWNK 48
           D++   W++
Sbjct: 254 DLLCNFWSQ 262


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 43/132 (32%), Positives = 67/132 (50%), Gaps = 3/132 (2%)
 Frame = -2

Query: 437 GGDLNDILDVSEKRGGTTREESSYRQFREFITSMNMVQIKHLGDSWTWANNRENEGFVEE 258
           GGD N+IL   EK GG +RE  +   FR  +   ++  ++ +G   TW   R  E  + E
Sbjct: 136 GGDFNEILSYDEKEGGASRERRAIVGFRNVMDDCSLGDLRFVGQWHTWERGRSPESRIRE 195

Query: 257 QLDRFFASPDWLYAYPMAIVHHFRKQSSDHSLLMLEVQPPAQPPSSR---FYFDKRFLAL 87
           +LDRF  S  WL+ +P A + H  +  SDH+ ++L        P  R   F+F+  +L  
Sbjct: 196 RLDRFIVSRSWLHLFPEAFIDHQVRYCSDHAAIVLRCLGNEGMPRRRAGGFWFETFWLLD 255

Query: 86  PGVEDVIQTIWN 51
              E+V++  WN
Sbjct: 256 DTCEEVVRGAWN 267


>emb|CCA66044.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 44/130 (33%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
 Frame = -2

Query: 437 GGDLNDILDVSEKRGGTTREESSYRQFREFITSMNMVQIKHLGDSWTWANNRENEGFVEE 258
           GGD N+I+   EK GG  R      QFRE +  + +  + + G   TW         + E
Sbjct: 134 GGDFNEIMSYEEKEGGADRVRRGMYQFRETMDDLFLRDLGYNGVWHTWERGNSLSTCIRE 193

Query: 257 QLDRFFASPDWLYAYPMAIVHHFRKQSSDHSLLMLEVQPPAQPPSS--RFYFDKRFLALP 84
           +LDRF  SP W   YP  IV H  +  SDH  + L      +P S   RF+F+  +L  P
Sbjct: 194 RLDRFVCSPSWATMYPNTIVDHSMRYKSDHLAICLRSNRTRRPTSKQRRFFFETSWLLDP 253

Query: 83  GVEDVIQTIW 54
             E+ I+  W
Sbjct: 254 TCEETIRDAW 263