BLASTX nr result

ID: Cephaelis21_contig00047504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00047504
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533281.1| pentatricopeptide repeat-containing protein,...   153   2e-35
ref|XP_002327713.1| predicted protein [Populus trichocarpa] gi|2...   152   3e-35
ref|XP_003538834.1| PREDICTED: pentatricopeptide repeat-containi...   147   9e-34
emb|CBI17585.3| unnamed protein product [Vitis vinifera]              143   1e-32
ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containi...   143   1e-32

>ref|XP_002533281.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526906|gb|EEF29113.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 652

 Score =  153 bits (386), Expect = 2e-35
 Identities = 75/121 (61%), Positives = 91/121 (75%)
 Frame = +3

Query: 3   MHHFAVQGDIKTVQRLFGMVRQSGLEADAFMYRVLICAYCKCERAALAMRVFEDMLNSGL 182
           M+HFA+QGDIKT Q+LF +VRQSG+E DA+M++VLI AYCKCERAALA RVFEDM NS L
Sbjct: 524 MYHFALQGDIKTAQKLFTIVRQSGVEPDAYMFKVLILAYCKCERAALAWRVFEDMKNSNL 583

Query: 183 IPDAATKDLVVKSLWKEGKLXXXXXXXXXXXXIGSVLPLALPGRLYTLSSDDLMRIYYIY 362
           +PD ATKD ++KSLWKEGK               +VLPL L G ++T+SS DL R+Y IY
Sbjct: 584 MPDTATKDFLIKSLWKEGKRKEAAIVEESCEESNNVLPLVLRGHIWTVSSADLTRVYNIY 643

Query: 363 S 365
           S
Sbjct: 644 S 644


>ref|XP_002327713.1| predicted protein [Populus trichocarpa] gi|222836798|gb|EEE75191.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  152 bits (384), Expect = 3e-35
 Identities = 78/121 (64%), Positives = 91/121 (75%)
 Frame = +3

Query: 3   MHHFAVQGDIKTVQRLFGMVRQSGLEADAFMYRVLICAYCKCERAALAMRVFEDMLNSGL 182
           M+HFA QGDIKTVQ+L  +VRQS +E DA+MY+VLI AYCKC+RAALA R+FEDM NS L
Sbjct: 388 MYHFASQGDIKTVQKLLTIVRQSDVEPDAYMYKVLIQAYCKCDRAALAWRIFEDMKNSNL 447

Query: 183 IPDAATKDLVVKSLWKEGKLXXXXXXXXXXXXIGSVLPLALPGRLYTLSSDDLMRIYYIY 362
           IPDAATKDL+VKSLWKEGKL            I SVLPL   G  +T+SS DL +IY +Y
Sbjct: 448 IPDAATKDLLVKSLWKEGKLKEAATVEESCDGINSVLPLKQHGHKWTVSSADLAKIYNLY 507

Query: 363 S 365
           S
Sbjct: 508 S 508


>ref|XP_003538834.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66631-like [Glycine max]
          Length = 658

 Score =  147 bits (371), Expect = 9e-34
 Identities = 73/121 (60%), Positives = 92/121 (76%)
 Frame = +3

Query: 3   MHHFAVQGDIKTVQRLFGMVRQSGLEADAFMYRVLICAYCKCERAALAMRVFEDMLNSGL 182
           M++F+  GDIKTVQ+LF MVRQSGLE DA++++ LI  YCK ERAALA R+FEDM NSGL
Sbjct: 534 MYYFSQLGDIKTVQKLFAMVRQSGLEPDAYLFKALIQGYCKSERAALAWRLFEDMKNSGL 593

Query: 183 IPDAATKDLVVKSLWKEGKLXXXXXXXXXXXXIGSVLPLALPGRLYTLSSDDLMRIYYIY 362
           +PD+ATK+L+VKSLWKEG+             I +VLPLAL G ++T+SS DL R+Y IY
Sbjct: 594 VPDSATKELLVKSLWKEGRRREAAAVEESYEEINTVLPLALQGHVWTVSSADLTRVYNIY 653

Query: 363 S 365
           S
Sbjct: 654 S 654


>emb|CBI17585.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  143 bits (361), Expect = 1e-32
 Identities = 71/121 (58%), Positives = 90/121 (74%)
 Frame = +3

Query: 3   MHHFAVQGDIKTVQRLFGMVRQSGLEADAFMYRVLICAYCKCERAALAMRVFEDMLNSGL 182
           M+HFA++GD KTVQ+LF MVRQSG+E DA+M++VLI  YCKCER+ALA+RVFEDM +  L
Sbjct: 497 MYHFALEGDFKTVQKLFMMVRQSGVEPDAYMFKVLIHGYCKCERSALALRVFEDMRSLNL 556

Query: 183 IPDAATKDLVVKSLWKEGKLXXXXXXXXXXXXIGSVLPLALPGRLYTLSSDDLMRIYYIY 362
           +PDAATK+L+VK LWKEG+             I   LP AL G ++T+SS DL R+Y IY
Sbjct: 557 MPDAATKNLLVKCLWKEGRRREAASVEERCEEINYGLPFALRGHMWTMSSADLKRVYDIY 616

Query: 363 S 365
           S
Sbjct: 617 S 617


>ref|XP_002269506.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66631-like [Vitis vinifera]
          Length = 660

 Score =  143 bits (361), Expect = 1e-32
 Identities = 71/121 (58%), Positives = 90/121 (74%)
 Frame = +3

Query: 3   MHHFAVQGDIKTVQRLFGMVRQSGLEADAFMYRVLICAYCKCERAALAMRVFEDMLNSGL 182
           M+HFA++GD KTVQ+LF MVRQSG+E DA+M++VLI  YCKCER+ALA+RVFEDM +  L
Sbjct: 521 MYHFALEGDFKTVQKLFMMVRQSGVEPDAYMFKVLIHGYCKCERSALALRVFEDMRSLNL 580

Query: 183 IPDAATKDLVVKSLWKEGKLXXXXXXXXXXXXIGSVLPLALPGRLYTLSSDDLMRIYYIY 362
           +PDAATK+L+VK LWKEG+             I   LP AL G ++T+SS DL R+Y IY
Sbjct: 581 MPDAATKNLLVKCLWKEGRRREAASVEERCEEINYGLPFALRGHMWTMSSADLKRVYDIY 640

Query: 363 S 365
           S
Sbjct: 641 S 641


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