BLASTX nr result

ID: Cephaelis21_contig00047464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00047464
         (444 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP53888.1| hypothetical protein LOC_Os10g29430 [Oryza sativa...    65   6e-09
gb|AAD32950.1| putative non-LTR retroelement reverse transcripta...    65   6e-09
ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [S...    65   8e-09
emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...    64   1e-08
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    61   1e-07

>gb|AAP53888.1| hypothetical protein LOC_Os10g29430 [Oryza sativa Japonica Group]
          Length = 439

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
 Frame = -1

Query: 363 RFVSELL---NHNSVDWNEHLLKT-FIEEDARVV*QVLISALGLGDKIVWSLSKDGKYNT 196
           R  SELL   +  S  W+E LL+  F EED +V+  + +  + L D + W     G ++ 
Sbjct: 218 RHASELLGLIDPFSGSWDEDLLQQIFWEEDVQVIKTIPVH-VELEDTLAWHFDPRGCFSV 276

Query: 195 NSGYRLAKETLQR--KNGDKGPSECREEEEGQMRRNIWGLGVKKKIQHFIWGAVHNRIPA 22
            S Y++ KE  +R  + G  G S   E E G   R +W +G+  KI+HF+W   HN +  
Sbjct: 277 RSAYKVQKEAERRSRRRGSAGSSN-GENETGVSWRKLWKMGIPGKIKHFLWRLSHNSLAM 335

Query: 21  GNNLKKK 1
             NLK++
Sbjct: 336 RCNLKRR 342


>gb|AAD32950.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 773

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
 Frame = -1

Query: 357 VSELLNHNSVDWNEHLL-KTFIEEDARVV*QVLISALGLGDKIVWSLSKDGKYNTNSGYR 181
           VS+LL      WNE LL K   + D   +  +  S  G  D I W  + DG Y+  SGY 
Sbjct: 416 VSDLLIEGR--WNEDLLCKLIHQNDIPHIRAIRPSITGANDAITWIYTHDGNYSVKSGYH 473

Query: 180 LAKETLQRKNGD-KGPSECREEEEGQMRRNIWGLGVKKKIQHFIWGAVHNRIPAGNNLKK 4
           L ++  Q+++     P+E   +    +  NIW      KI+HF W + HN +P   NLK+
Sbjct: 474 LLRKLSQQQHASLPSPNEVSAQT---VFTNIWKQNAPPKIKHFWWRSAHNALPTAGNLKR 530

Query: 3   K 1
           +
Sbjct: 531 R 531


>ref|XP_002466618.1| hypothetical protein SORBIDRAFT_01g011130 [Sorghum bicolor]
           gi|241920472|gb|EER93616.1| hypothetical protein
           SORBIDRAFT_01g011130 [Sorghum bicolor]
          Length = 463

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 35/120 (29%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
 Frame = -1

Query: 357 VSELLNHNSVDWNEHLLKT-FIEEDARVV*QVLISALGLGDKIVWSLSKDGKYNTNSGYR 181
           V+EL+N  +  W+E L++  F EEDA V+  + +   G  + + W   K G ++  S Y+
Sbjct: 57  VAELINPVTRQWDELLVRDIFWEEDAEVILALPVYQ-GRSNMVAWHYDKHGVFSVKSAYK 115

Query: 180 LAKETLQRKNGDKGPSECREEEEGQMRRNIWGLGVKKKIQHFIWGAVHNRIPAGNNLKKK 1
           +A++T  R +  +G           + + +W L    KI+HF+W  +HN  P  +NL ++
Sbjct: 116 VARDTYIRNHTSQGQQGGSNPGPLSLWKRVWKLSCPNKIKHFLWRFLHNSHPLRDNLIRR 175


>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
            gi|7267666|emb|CAB78094.1| RNA-directed DNA
            polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/119 (27%), Positives = 59/119 (49%)
 Frame = -1

Query: 357  VSELLNHNSVDWNEHLLKTFIEEDARVV*QVLISALGLGDKIVWSLSKDGKYNTNSGYRL 178
            V +L+ H+   WN   ++  + +    + ++ I+AL L D +VW   K G+Y T +GY L
Sbjct: 896  VHDLICHDVKSWNVEAIRKHLPQYEDQIRKITINALPLQDSLVWLPVKSGEYTTKTGYAL 955

Query: 177  AKETLQRKNGDKGPSECREEEEGQMRRNIWGLGVKKKIQHFIWGAVHNRIPAGNNLKKK 1
            AK            S    + +   ++NIW +    K++HF+W A+   +P G  L ++
Sbjct: 956  AKLN----------SFPASQLDFNWQKNIWKIHTSPKVKHFLWKAMKGALPVGEALSRR 1004


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
 Frame = -1

Query: 369  NIRFVSELLNHNSVDWNEHLLKTFIEE-DARVV*QVLISALGLGDKIVWSLSKDGKYNTN 193
            +IR+VSEL++ + ++W   LL++F+ E D R +    +SA  + D++ W+ +KD  Y+  
Sbjct: 959  SIRWVSELIDFDRMEWKTSLLESFLNERDLRCILASPLSATPVPDELTWAFTKDATYSVK 1018

Query: 192  SGYRLAKETLQRKNGDKGPSECREEEEGQMRRNIWGLGVKKKIQHFIWGAVHNRIPAGNN 13
            + Y +       K G+        +   Q   +IW L V  K++HF+W      +P  + 
Sbjct: 1019 TAYMIG------KGGNL-------DNFHQAWVDIWSLDVSPKVRHFLWRLCTTSLPVRSL 1065

Query: 12   LKKK 1
            LK +
Sbjct: 1066 LKHR 1069


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