BLASTX nr result

ID: Cephaelis21_contig00047451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00047451
         (560 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22241.3| unnamed protein product [Vitis vinifera]              198   4e-49
ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containi...   198   4e-49
ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|2...   181   5e-44
ref|NP_197032.1| pentatricopeptide repeat-containing protein [Ar...   178   6e-43
ref|XP_002871658.1| pentatricopeptide repeat-containing protein ...   176   2e-42

>emb|CBI22241.3| unnamed protein product [Vitis vinifera]
          Length = 1256

 Score =  198 bits (504), Expect = 4e-49
 Identities = 99/184 (53%), Positives = 134/184 (72%)
 Frame = -2

Query: 559 RNLKPDINTCNALMSALFKEGLWKQSLDILLEMKDWGITLNLSTFRILLAGVLKARQLGE 380
           R+LKPDI + NA++S +FKEGLWK + DIL EM D GI  +L TFR+LLAG  KAR+ GE
Sbjct: 407 RDLKPDICSYNAIISGVFKEGLWKHAQDILHEMVDMGIKPDLLTFRVLLAGYCKARRFGE 466

Query: 379 VKTIVGLMEDHGLIRLSLPENYLSTALALLGLDHLTVKVRRDNDVQFSKTQFFDDLGNGL 200
            K  VG M ++GLI+L   E+ LS A  +L LD L ++V+RDNDV FSKT+FFD+LGNGL
Sbjct: 467 AKATVGEMVNYGLIQLCSQEDPLSKAFMVLELDPLAIRVKRDNDVGFSKTEFFDNLGNGL 526

Query: 199 YLETDLDDFDEALVKVLDDAMFPDFNSIVLTNCRKGDIIIALQTVDEMAPWGQALSTSSA 20
           YLETD+D++++ +  +L+D+M PDFN ++   C  G++  A+  VDEM  WGQ LS S+ 
Sbjct: 527 YLETDVDEYEKKVTGILEDSMVPDFNLLITRACAGGNVKTAMMVVDEMVRWGQELSLSAF 586

Query: 19  STLV 8
           S L+
Sbjct: 587 SALL 590


>ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g15280-like [Vitis vinifera]
          Length = 1273

 Score =  198 bits (504), Expect = 4e-49
 Identities = 99/184 (53%), Positives = 134/184 (72%)
 Frame = -2

Query: 559 RNLKPDINTCNALMSALFKEGLWKQSLDILLEMKDWGITLNLSTFRILLAGVLKARQLGE 380
           R+LKPDI + NA++S +FKEGLWK + DIL EM D GI  +L TFR+LLAG  KAR+ GE
Sbjct: 424 RDLKPDICSYNAIISGVFKEGLWKHAQDILHEMVDMGIKPDLLTFRVLLAGYCKARRFGE 483

Query: 379 VKTIVGLMEDHGLIRLSLPENYLSTALALLGLDHLTVKVRRDNDVQFSKTQFFDDLGNGL 200
            K  VG M ++GLI+L   E+ LS A  +L LD L ++V+RDNDV FSKT+FFD+LGNGL
Sbjct: 484 AKATVGEMVNYGLIQLCSQEDPLSKAFMVLELDPLAIRVKRDNDVGFSKTEFFDNLGNGL 543

Query: 199 YLETDLDDFDEALVKVLDDAMFPDFNSIVLTNCRKGDIIIALQTVDEMAPWGQALSTSSA 20
           YLETD+D++++ +  +L+D+M PDFN ++   C  G++  A+  VDEM  WGQ LS S+ 
Sbjct: 544 YLETDVDEYEKKVTGILEDSMVPDFNLLITRACAGGNVKTAMMVVDEMVRWGQELSLSAF 603

Query: 19  STLV 8
           S L+
Sbjct: 604 SALL 607


>ref|XP_002323869.1| predicted protein [Populus trichocarpa] gi|222866871|gb|EEF04002.1|
           predicted protein [Populus trichocarpa]
          Length = 1158

 Score =  181 bits (460), Expect = 5e-44
 Identities = 94/184 (51%), Positives = 128/184 (69%)
 Frame = -2

Query: 559 RNLKPDINTCNALMSALFKEGLWKQSLDILLEMKDWGITLNLSTFRILLAGVLKARQLGE 380
           R LKP+I   +AL+SALFKEG+W+ + DIL EM D G    LSTF+ILLAG  +AR+  E
Sbjct: 309 RGLKPNIWCYHALISALFKEGMWEHAQDILDEMVDMGTAPVLSTFKILLAGYCRARRFDE 368

Query: 379 VKTIVGLMEDHGLIRLSLPENYLSTALALLGLDHLTVKVRRDNDVQFSKTQFFDDLGNGL 200
           VK ++  M + GLI  S  E+ LS A  +L L  L+V+++RDNDV+FSKT+FFD+LGNGL
Sbjct: 369 VKVVIHEMVNRGLIESSALEDPLSKAFMVLELKTLSVRLKRDNDVEFSKTEFFDNLGNGL 428

Query: 199 YLETDLDDFDEALVKVLDDAMFPDFNSIVLTNCRKGDIIIALQTVDEMAPWGQALSTSSA 20
           YL+TDLD++D+ +  +L+D+M PDF+ +V   C  G+  +A     EMA WGQ LS S  
Sbjct: 429 YLDTDLDEYDKRVAGILEDSMVPDFDFLVRKECSNGNFKVAYSLTGEMARWGQELSLSVV 488

Query: 19  STLV 8
           S L+
Sbjct: 489 SALL 492


>ref|NP_197032.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180846|sp|Q9LXF4.1|PP384_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g15280 gi|7671497|emb|CAB89338.1| putative protein
           [Arabidopsis thaliana] gi|332004760|gb|AED92143.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 1227

 Score =  178 bits (451), Expect = 6e-43
 Identities = 90/186 (48%), Positives = 129/186 (69%)
 Frame = -2

Query: 559 RNLKPDINTCNALMSALFKEGLWKQSLDILLEMKDWGITLNLSTFRILLAGVLKARQLGE 380
           +  KPD+ + NA++S LF++GLW+ +  IL EMK+ G+ L+LSTF+I++ G  KARQ  E
Sbjct: 387 KGYKPDVYSYNAILSGLFRKGLWQHTHCILDEMKENGMMLSLSTFKIMVTGYCKARQFEE 446

Query: 379 VKTIVGLMEDHGLIRLSLPENYLSTALALLGLDHLTVKVRRDNDVQFSKTQFFDDLGNGL 200
            K IV  M  +GLI  S  E+ LS A +L+G D L V+++RDND  FSK +FFDDLGNGL
Sbjct: 447 AKRIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKAEFFDDLGNGL 506

Query: 199 YLETDLDDFDEALVKVLDDAMFPDFNSIVLTNCRKGDIIIALQTVDEMAPWGQALSTSSA 20
           YL TDLD +++ +  VLD ++ P+FNS+++     GD+  AL+ +DEMA WGQ LS  S 
Sbjct: 507 YLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRASEDGDLQTALRLLDEMARWGQKLSRRSF 566

Query: 19  STLVNN 2
           + L+ +
Sbjct: 567 AVLMRS 572


>ref|XP_002871658.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297317495|gb|EFH47917.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 1223

 Score =  176 bits (446), Expect = 2e-42
 Identities = 88/186 (47%), Positives = 129/186 (69%)
 Frame = -2

Query: 559 RNLKPDINTCNALMSALFKEGLWKQSLDILLEMKDWGITLNLSTFRILLAGVLKARQLGE 380
           +  KPD+ + +A++S LF++GLW+ +  IL EMK+ G+ L+LST +I++ G  KARQ  E
Sbjct: 383 KGFKPDVCSYDAILSGLFRKGLWQHTHCILDEMKENGMLLSLSTCKIMVTGYCKARQFEE 442

Query: 379 VKTIVGLMEDHGLIRLSLPENYLSTALALLGLDHLTVKVRRDNDVQFSKTQFFDDLGNGL 200
            K IV  M  +GLI  S  E+ LS A +L+G D L V+++RDND  FSK +FFDDLGNGL
Sbjct: 443 AKMIVNKMFGYGLIEASKVEDPLSEAFSLVGFDPLAVRLKRDNDSTFSKAEFFDDLGNGL 502

Query: 199 YLETDLDDFDEALVKVLDDAMFPDFNSIVLTNCRKGDIIIALQTVDEMAPWGQALSTSSA 20
           YL TDLD +++ +  VLD ++ P+FNS+++  C+ GD+  AL+ +DEM  WGQ LS  S 
Sbjct: 503 YLHTDLDAYEQRVNMVLDRSVLPEFNSLIVRACKDGDLQTALRLLDEMTRWGQKLSRRSF 562

Query: 19  STLVNN 2
           + L+ +
Sbjct: 563 AVLMRS 568


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