BLASTX nr result

ID: Cephaelis21_contig00047416 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00047416
         (262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309169.1| predicted protein [Populus trichocarpa] gi|2...   123   1e-26
ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat...   116   2e-24
ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat...   115   4e-24
ref|XP_002323645.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24
ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago t...   109   2e-22

>ref|XP_002309169.1| predicted protein [Populus trichocarpa] gi|222855145|gb|EEE92692.1|
           predicted protein [Populus trichocarpa]
          Length = 619

 Score =  123 bits (309), Expect = 1e-26
 Identities = 56/86 (65%), Positives = 70/86 (81%)
 Frame = +3

Query: 3   DVFLRMTIKDIVIWNAIISGLAMGGHVISAFSCFGQLEKNGMMPDESTFLGLLCACSHAG 182
           +VF  M  KDIV+WNA ISGLAM GHV +AF  FGQ+EK+G+ PD +TF+GLLCAC+HAG
Sbjct: 303 EVFRGMRKKDIVVWNAAISGLAMSGHVKAAFGLFGQMEKSGIEPDGNTFVGLLCACTHAG 362

Query: 183 LVDDGRLYFYSMSRIYSVYPTIEHYG 260
           LVD+GR YF SM R++++ P IEHYG
Sbjct: 363 LVDEGRQYFNSMERVFTLTPEIEHYG 388


>ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  116 bits (290), Expect = 2e-24
 Identities = 55/86 (63%), Positives = 66/86 (76%)
 Frame = +3

Query: 3   DVFLRMTIKDIVIWNAIISGLAMGGHVISAFSCFGQLEKNGMMPDESTFLGLLCACSHAG 182
           +VF  M  KD V++NA+ISGLAM GHV +AF  FGQ+ K GM PD +TF+GLLC C+HAG
Sbjct: 360 EVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGVFGQMVKVGMQPDGNTFVGLLCGCTHAG 419

Query: 183 LVDDGRLYFYSMSRIYSVYPTIEHYG 260
           LVDDG  YF  MS ++SV PTIEHYG
Sbjct: 420 LVDDGHRYFSGMSSVFSVTPTIEHYG 445


>ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  115 bits (288), Expect = 4e-24
 Identities = 54/86 (62%), Positives = 67/86 (77%)
 Frame = +3

Query: 3   DVFLRMTIKDIVIWNAIISGLAMGGHVISAFSCFGQLEKNGMMPDESTFLGLLCACSHAG 182
           +VF  M  KD V+WNAIISGLAM G+V  +F  FGQ+EK G+ PD +TF+GLLC C+HAG
Sbjct: 370 EVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAG 429

Query: 183 LVDDGRLYFYSMSRIYSVYPTIEHYG 260
           LVD+GR YF SM R +S+ P+IEHYG
Sbjct: 430 LVDEGRRYFNSMYRFFSLTPSIEHYG 455


>ref|XP_002323645.1| predicted protein [Populus trichocarpa] gi|222868275|gb|EEF05406.1|
           predicted protein [Populus trichocarpa]
          Length = 682

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/86 (60%), Positives = 66/86 (76%)
 Frame = +3

Query: 3   DVFLRMTIKDIVIWNAIISGLAMGGHVISAFSCFGQLEKNGMMPDESTFLGLLCACSHAG 182
           +VF  M  KD V+WNA ISGLAM GHV  A   FGQ+EK+G+ PD +TF+GLLCAC+HAG
Sbjct: 366 EVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAG 425

Query: 183 LVDDGRLYFYSMSRIYSVYPTIEHYG 260
           LV++GR YF SM  ++++ P IEHYG
Sbjct: 426 LVEEGRRYFNSMECVFTLTPEIEHYG 451


>ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355486292|gb|AES67495.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 678

 Score =  109 bits (273), Expect = 2e-22
 Identities = 54/85 (63%), Positives = 65/85 (76%)
 Frame = +3

Query: 6   VFLRMTIKDIVIWNAIISGLAMGGHVISAFSCFGQLEKNGMMPDESTFLGLLCACSHAGL 185
           V+  M  KD V++NA+ISGLAM G V +AF  FGQ+ K G+ P+E TF+GLLC C+HAGL
Sbjct: 363 VYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGL 422

Query: 186 VDDGRLYFYSMSRIYSVYPTIEHYG 260
           VDDGR YF SMS  +SV PTIEHYG
Sbjct: 423 VDDGRHYFNSMSHDFSVTPTIEHYG 447


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