BLASTX nr result

ID: Cephaelis21_contig00047328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00047328
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303023.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat...   144   1e-32
emb|CBI38389.3| unnamed protein product [Vitis vinifera]              144   1e-32
ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat...   143   2e-32
emb|CBI18728.3| unnamed protein product [Vitis vinifera]              143   2e-32

>ref|XP_002303023.1| predicted protein [Populus trichocarpa] gi|222844749|gb|EEE82296.1|
           predicted protein [Populus trichocarpa]
          Length = 621

 Score =  149 bits (376), Expect = 2e-34
 Identities = 68/85 (80%), Positives = 73/85 (85%)
 Frame = -3

Query: 256 ISQDIDDQEKNWALARHSERLAICYGLISTQPDTTIRVVKNLRVCNDCHYMIKLTSQITG 77
           +  DI+  EK WALA HSERLAICYGLIST+P TT+RVVKNLRVCNDCH  IKL S IT 
Sbjct: 537 VLHDIEKSEKEWALAIHSERLAICYGLISTKPLTTLRVVKNLRVCNDCHLTIKLISNITR 596

Query: 76  RKIVVRDRNRFHHFENGICSCGDYW 2
           RKIVVRDRNRFHHFENG+CSCGDYW
Sbjct: 597 RKIVVRDRNRFHHFENGVCSCGDYW 621


>ref|XP_003635033.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Vitis vinifera]
          Length = 650

 Score =  144 bits (362), Expect = 1e-32
 Identities = 66/85 (77%), Positives = 73/85 (85%)
 Frame = -3

Query: 256 ISQDIDDQEKNWALARHSERLAICYGLISTQPDTTIRVVKNLRVCNDCHYMIKLTSQITG 77
           + QDI+D EK WALA HSERLAICYGLIST+P T IRV+KNLRVC DCH  IKL ++IT 
Sbjct: 566 VLQDIEDGEKEWALAMHSERLAICYGLISTEPCTMIRVMKNLRVCYDCHSAIKLIAKITR 625

Query: 76  RKIVVRDRNRFHHFENGICSCGDYW 2
           RKIVVRDRNRFH+FENG CSCGDYW
Sbjct: 626 RKIVVRDRNRFHYFENGACSCGDYW 650


>emb|CBI38389.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  144 bits (362), Expect = 1e-32
 Identities = 66/85 (77%), Positives = 73/85 (85%)
 Frame = -3

Query: 256 ISQDIDDQEKNWALARHSERLAICYGLISTQPDTTIRVVKNLRVCNDCHYMIKLTSQITG 77
           + QDI+D EK WALA HSERLAICYGLIST+P T IRV+KNLRVC DCH  IKL ++IT 
Sbjct: 530 VLQDIEDGEKEWALAMHSERLAICYGLISTEPCTMIRVMKNLRVCYDCHSAIKLIAKITR 589

Query: 76  RKIVVRDRNRFHHFENGICSCGDYW 2
           RKIVVRDRNRFH+FENG CSCGDYW
Sbjct: 590 RKIVVRDRNRFHYFENGACSCGDYW 614


>ref|XP_003635064.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59200, chloroplastic-like [Vitis vinifera]
          Length = 650

 Score =  143 bits (360), Expect = 2e-32
 Identities = 65/85 (76%), Positives = 73/85 (85%)
 Frame = -3

Query: 256 ISQDIDDQEKNWALARHSERLAICYGLISTQPDTTIRVVKNLRVCNDCHYMIKLTSQITG 77
           + QDI+D EK WALA HSERLAICYGLIST+P T IRV+KNLRVC DCH  IKL ++IT 
Sbjct: 566 VLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMKNLRVCYDCHSAIKLIAKITR 625

Query: 76  RKIVVRDRNRFHHFENGICSCGDYW 2
           RK+VVRDRNRFH+FENG CSCGDYW
Sbjct: 626 RKVVVRDRNRFHYFENGACSCGDYW 650


>emb|CBI18728.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  143 bits (360), Expect = 2e-32
 Identities = 65/85 (76%), Positives = 73/85 (85%)
 Frame = -3

Query: 256 ISQDIDDQEKNWALARHSERLAICYGLISTQPDTTIRVVKNLRVCNDCHYMIKLTSQITG 77
           + QDI+D EK WALA HSERLAICYGLIST+P T IRV+KNLRVC DCH  IKL ++IT 
Sbjct: 523 VLQDIEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMKNLRVCYDCHSAIKLIAKITR 582

Query: 76  RKIVVRDRNRFHHFENGICSCGDYW 2
           RK+VVRDRNRFH+FENG CSCGDYW
Sbjct: 583 RKVVVRDRNRFHYFENGACSCGDYW 607


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