BLASTX nr result

ID: Cephaelis21_contig00047273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00047273
         (422 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274780.2| PREDICTED: pentatricopeptide repeat-containi...   221   4e-56
emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]   221   4e-56
ref|XP_002511861.1| pentatricopeptide repeat-containing protein,...   186   2e-45
gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossyp...   149   2e-34
gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]        149   3e-34

>ref|XP_002274780.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 804

 Score =  221 bits (564), Expect = 4e-56
 Identities = 102/140 (72%), Positives = 118/140 (84%)
 Frame = +1

Query: 1   EALECFLNMLHCGIKPNDVVFISVLSTCSHCRLEYEGWSWFYKMEETYGITPKLAHYACM 180
           EALE F NML CG+KPN+VVFISVLS CSHC LE+EGWS F  ME+ YGI PKL HYACM
Sbjct: 396 EALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYACM 455

Query: 181 VDMLSRQGNVEGAFEFANNMPIEPDKRIWGAILAGCRKTSGSFEISEAVAKQLISLDPKN 360
           VD++SR+GN+EGA +F N MP+EPDKRIWGA+LAGCR T GS EI+E VA++LI LDP+N
Sbjct: 456 VDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIEIAELVAERLIGLDPQN 515

Query: 361 ASYRVILSNLYAEQGRWKEV 420
            SY VILSNLYAEQGRW +V
Sbjct: 516 TSYYVILSNLYAEQGRWGDV 535


>emb|CAN75306.1| hypothetical protein VITISV_040403 [Vitis vinifera]
          Length = 826

 Score =  221 bits (564), Expect = 4e-56
 Identities = 102/140 (72%), Positives = 118/140 (84%)
 Frame = +1

Query: 1   EALECFLNMLHCGIKPNDVVFISVLSTCSHCRLEYEGWSWFYKMEETYGITPKLAHYACM 180
           EALE F NML CG+KPN+VVFISVLS CSHC LE+EGWS F  ME+ YGI PKL HYACM
Sbjct: 475 EALETFSNMLACGVKPNEVVFISVLSACSHCGLEHEGWSCFSSMEQKYGIIPKLPHYACM 534

Query: 181 VDMLSRQGNVEGAFEFANNMPIEPDKRIWGAILAGCRKTSGSFEISEAVAKQLISLDPKN 360
           VD++SR+GN+EGA +F N MP+EPDKRIWGA+LAGCR T GS EI+E VA++LI LDP+N
Sbjct: 535 VDLISRRGNIEGALQFVNKMPMEPDKRIWGALLAGCRSTHGSIEIAELVAERLIGLDPQN 594

Query: 361 ASYRVILSNLYAEQGRWKEV 420
            SY VILSNLYAEQGRW +V
Sbjct: 595 TSYYVILSNLYAEQGRWGDV 614


>ref|XP_002511861.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549041|gb|EEF50530.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 751

 Score =  186 bits (472), Expect = 2e-45
 Identities = 86/141 (60%), Positives = 108/141 (76%), Gaps = 1/141 (0%)
 Frame = +1

Query: 1   EALECFLNMLHCGIKPNDVVFISVLSTCSHCRLEYEGWSWFYKMEETYGITPKLAHYACM 180
           EALE F +ML+ G KPN+ VF+S+LS CS C LE+EG  WFY M+E Y + PKL+HYACM
Sbjct: 396 EALETFADMLNWGFKPNETVFLSILSVCSQCGLEHEGRKWFYYMQEKYRLAPKLSHYACM 455

Query: 181 VDMLSRQGNVEGAFEFANNMPIEPDKRIWGAILAGCR-KTSGSFEISEAVAKQLISLDPK 357
           VD+LSR G++E A  F   MP+ PDKRIWGA+LAGCR +  GS E++E V +QL +LDP+
Sbjct: 456 VDLLSRHGHIEEALMFVKKMPVVPDKRIWGAVLAGCRSRGDGSIEVAEFVVRQLSALDPE 515

Query: 358 NASYRVILSNLYAEQGRWKEV 420
           N SY V L +LYAEQGRWK+V
Sbjct: 516 NTSYYVTLLDLYAEQGRWKDV 536


>gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  149 bits (376), Expect = 2e-34
 Identities = 69/140 (49%), Positives = 96/140 (68%)
 Frame = +1

Query: 1   EALECFLNMLHCGIKPNDVVFISVLSTCSHCRLEYEGWSWFYKMEETYGITPKLAHYACM 180
           EA+  F  M   GI+P++V FIS+L  CSH  L  +GW +FY M+  + I PKL HYACM
Sbjct: 516 EAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACM 575

Query: 181 VDMLSRQGNVEGAFEFANNMPIEPDKRIWGAILAGCRKTSGSFEISEAVAKQLISLDPKN 360
           VD+LSR GN+  A+EF   +PI PD  IWGA+L GCR      E++E VA+++  L+P+N
Sbjct: 576 VDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNYH-DIELAEKVAERVFELEPEN 634

Query: 361 ASYRVILSNLYAEQGRWKEV 420
           + Y V+L+N+YAE  +W+EV
Sbjct: 635 SGYYVLLANIYAEAEKWEEV 654


>gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  149 bits (375), Expect = 3e-34
 Identities = 69/140 (49%), Positives = 95/140 (67%)
 Frame = +1

Query: 1   EALECFLNMLHCGIKPNDVVFISVLSTCSHCRLEYEGWSWFYKMEETYGITPKLAHYACM 180
           EA+  F  M   GI+P++V FIS+L  CSH  L  +GW +FY M+  + I PKL HYACM
Sbjct: 516 EAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACM 575

Query: 181 VDMLSRQGNVEGAFEFANNMPIEPDKRIWGAILAGCRKTSGSFEISEAVAKQLISLDPKN 360
           VD+LSR GN+  A+EF   +PI PD  IWGA+L GCR      E++E VA+++  L+P+N
Sbjct: 576 VDLLSRTGNLSKAYEFMETLPIAPDATIWGALLCGCRNYH-DIELAEKVAERVFELEPEN 634

Query: 361 ASYRVILSNLYAEQGRWKEV 420
             Y V+L+N+YAE  +W+EV
Sbjct: 635 TGYYVLLANIYAEAEKWEEV 654


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