BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00047217
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEE51773.1| hypothetical protein OsJ_33218 [Oryza sativa Japo...    64   2e-08
ref|XP_003621614.1| DNA-directed RNA polymerase III subunit RPC6...    62   7e-08
ref|XP_002451167.1| hypothetical protein SORBIDRAFT_05g025250 [S...    61   1e-07
gb|ABI34321.1| RNase H family protein [Solanum demissum]               60   2e-07
ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...    59   5e-07

>gb|EEE51773.1| hypothetical protein OsJ_33218 [Oryza sativa Japonica Group]
          Length = 378

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 41/123 (33%), Positives = 57/123 (46%), Gaps = 3/123 (2%)
 Frame = +2

Query: 35  VWRLGIPLKLSILLWQILNGSLPFDDVLRRLGFTLASKCPFCPNADSISHRFYE*SLARE 214
           +W+L IPLK+ I LW +  G +   D L +  +     C FC N ++I H F+E   A  
Sbjct: 229 LWKLKIPLKVKIFLWYLRRGMVLTKDNLIKRKWQGNKNCCFCCNDETIRHLFFECRFALS 288

Query: 215 TWEYFGNLFGYPSS---AGDLRSFLFSIWNHRDPNAPLVFLFPAVVCWSL*KARNNFVYD 385
            W       G P     A    S+L  I N+   +   V L  A  CWSL   RNN V+D
Sbjct: 289 VWSIIQAASGLPPPHCVAHMFGSWLDGIHNNLKSH---VLLGAAATCWSLWLCRNNVVFD 345

Query: 386 NRR 394
            ++
Sbjct: 346 KKK 348


>ref|XP_003621614.1| DNA-directed RNA polymerase III subunit RPC6 [Medicago truncatula]
           gi|355496629|gb|AES77832.1| DNA-directed RNA polymerase
           III subunit RPC6 [Medicago truncatula]
          Length = 456

 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 4/147 (2%)
 Frame = +2

Query: 35  VWRLGIPLKLSILLWQILNGSLPFDDVLRRLGFTLASKCPFCPNAD-SISHRFYE*SLAR 211
           +W+L +P ++   +W++    +P    LRR G  L + CP C +AD S +HRF    +  
Sbjct: 263 IWKLPLPTRVRNFMWKLARNIIPTRCNLRRRGVVLDTVCPLCFDADESSNHRFMACPMTL 322

Query: 212 ETWEYFGNLFGY-PSSAGDLRSFLFSIWNHRDPNAPLVFLFPAVVCWSL*KARNNFVYDN 388
           + W  F +  G+ P    DL ++L S  + ++P A  +F    V  W +   RN  +++ 
Sbjct: 323 QVW--FASPLGFQPPPQTDLNAWLLSWLSAKEPLAVQLF---CVCLWKIWFFRNQVIFNQ 377

Query: 389 RRPTARLVIASAMLLLKD--ITWLQPP 463
                R+V ASA   + +  + W  PP
Sbjct: 378 VVFEPRMVAASAHDFVSEFKLFWTAPP 404


>ref|XP_002451167.1| hypothetical protein SORBIDRAFT_05g025250 [Sorghum bicolor]
           gi|241937010|gb|EES10155.1| hypothetical protein
           SORBIDRAFT_05g025250 [Sorghum bicolor]
          Length = 298

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 39/143 (27%), Positives = 65/143 (45%), Gaps = 2/143 (1%)
 Frame = +2

Query: 35  VWRLGIPLKLSILLWQILNGSLPFDDVLRRLGFTLASKCPFCPNADSISHRFYE*SLARE 214
           +W++ +P K+ I LW +  G +   D L R  +   +KC FC + ++I H F +    + 
Sbjct: 119 IWQIKVPTKIKIFLWYLKKGVILTKDNLVRRRWNGDTKCCFCHSPETIHHLFMDCLFVKF 178

Query: 215 TWEYFGNLFGYPSSAGDLRSFLFSIWNHRDPNA--PLVFLFPAVVCWSL*KARNNFVYDN 388
            W     LFG     G     LF+ W+ R       L+    + +CW++   RN  V+D 
Sbjct: 179 LWRAVHLLFGIAPPQG--IDDLFNRWSKRANKKYNTLLLTAASALCWAVWLTRNEVVFDK 236

Query: 389 RRPTARLVIASAMLLLKDITWLQ 457
            RP + L      +L +   WL+
Sbjct: 237 CRPKSFL-----QVLFRGTHWLR 254


>gb|ABI34321.1| RNase H family protein [Solanum demissum]
          Length = 945

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 5/125 (4%)
 Frame = +2

Query: 35  VWRLGIPLKLSILLWQILNGSLPFDDVLRRLGFTLASKCPFCPN--ADSISHRFYE*SLA 208
           +W    P K+S L W+++   LPF D + +    + S C  C N   ++I+H F    +A
Sbjct: 570 IWHGKFPFKMSFLTWRLVQNKLPFYDTVGKFVDNIDSNCVCCKNMKTETINHVFLNSDVA 629

Query: 209 RETWEYFGNLFGYPSSAGDLRSFLFSIWN---HRDPNAPLVFLFPAVVCWSL*KARNNFV 379
              W+ FG   G  + A    + L + WN   H   +  ++   P ++ W + K R    
Sbjct: 630 SYLWKKFGGTLGIDTRASSTINLLKTWWNVQTHNSIHNVIIHTLPILIFWEIWKRRCACK 689

Query: 380 YDNRR 394
           Y +++
Sbjct: 690 YGDQK 694


>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score = 58.9 bits (141), Expect = 5e-07
 Identities = 45/143 (31%), Positives = 73/143 (51%), Gaps = 3/143 (2%)
 Frame = +2

Query: 38  WRLGIPLKLSILLWQILNGSLPFDDVLRRLGFTLASKCPFC-PNADSISHRFYE*SLARE 214
           W+L IP K+  L+W+I +  +     LR     L   C +C    +++ H  +  S+ARE
Sbjct: 432 WKLKIPTKVRNLMWKICSNCIRTAMNLRMRYVDLDPLCKWCNREPETLFHVLFGCSMARE 491

Query: 215 TWEYFGNLFGYPSSAGDLRSFL--FSIWNHRDPNAPLVFLFPAVVCWSL*KARNNFVYDN 388
            W+  G  F +P+ +  + S++  F I NH D  A +     A+VC SL   RN++V++ 
Sbjct: 492 CWDLLGFRFSFPTES-PICSWIQNFFIDNHEDTCAKM-----ALVCGSLWNQRNHWVWNK 545

Query: 389 RRPTARLVIASAMLLLKDITWLQ 457
           +  T   VI+ A  LL+  T  Q
Sbjct: 546 QSNTTYGVISPANQLLEQRTRAQ 568