BLASTX nr result

ID: Cephaelis21_contig00047055 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00047055
         (453 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula] g...    69   5e-10
gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demis...    68   9e-10
gb|ABN05720.1| RNA-directed DNA polymerase (Reverse transcriptas...    66   3e-09
gb|ABD28747.2| Putative non-LTR retroelement reverse transcripta...    65   4e-09
gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]              64   1e-08

>ref|XP_003635790.1| Receptor-like kinase [Medicago truncatula]
            gi|355501725|gb|AES82928.1| Receptor-like kinase
            [Medicago truncatula]
          Length = 2313

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 32/95 (33%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
 Frame = +3

Query: 18   GGRLILVRHVLQSMPIYTMATMNPPQAVLWHFESKFSKFFWGSTDASPRRVWRSWEKLVF 197
            GGRL+L++ VL S+P+Y ++    P  ++   ES F +FFWG ++ + +  W  W+ +  
Sbjct: 1327 GGRLVLLKFVLSSLPVYFLSFFKAPAGIISLIESIFKRFFWGGSEDNNKISWIKWDDICV 1386

Query: 198  PISKNGIGVRRLTDVIKAYSCKLWWK-LQHNLGVW 299
            P    G+GVRRL +   +   K  W+ L    G+W
Sbjct: 1387 PKEDGGLGVRRLREFNFSLLGKWCWRMLVDKEGLW 1421


>gb|AAT38805.1| hypothetical protein SDM1_47t00008 [Solanum demissum]
          Length = 1155

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 28/87 (32%), Positives = 49/87 (56%)
 Frame = +3

Query: 3   RLFLPGGRLILVRHVLQSMPIYTMATMNPPQAVLWHFESKFSKFFWGSTDASPRRVWRSW 182
           +L   GGR++L++HVL ++P + +  + P +  L + E   ++FFW S +   +  W +W
Sbjct: 703 KLLSTGGRVVLIKHVLLAIPTHLLVALQPTKGTLDNIEIYLARFFWSSKEEGGKHHWIAW 762

Query: 183 EKLVFPISKNGIGVRRLTDVIKAYSCK 263
             L  P  +  I +RR+ DV  A+S K
Sbjct: 763 RTLCLPFEEGWINIRRIGDVCNAFSYK 789


>gb|ABN05720.1| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 391

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 31/87 (35%), Positives = 49/87 (56%)
 Frame = +3

Query: 18  GGRLILVRHVLQSMPIYTMATMNPPQAVLWHFESKFSKFFWGSTDASPRRVWRSWEKLVF 197
           GGRLILV+ VL ++P+Y ++    P   +   +S  SKFFWG ++   +  W  W+++  
Sbjct: 195 GGRLILVKSVLSALPVYALSFFKAPAGTISSIDSILSKFFWGGSEDLRKISWVGWQRVCK 254

Query: 198 PISKNGIGVRRLTDVIKAYSCKLWWKL 278
                G+GVRRL +  +A   K  W+L
Sbjct: 255 RKEYGGLGVRRLREFNEALLGKWCWRL 281


>gb|ABD28747.2| Putative non-LTR retroelement reverse transcriptase, related
           [Medicago truncatula]
          Length = 193

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/87 (35%), Positives = 47/87 (54%)
 Frame = +3

Query: 18  GGRLILVRHVLQSMPIYTMATMNPPQAVLWHFESKFSKFFWGSTDASPRRVWRSWEKLVF 197
           GGRLIL++ VL ++P+Y ++    P  ++   ES F+KFFWG  +   +  W  W+ L  
Sbjct: 12  GGRLILLKSVLTALPVYALSFFKAPSGIISSIESLFNKFFWGGGEEKRKISWVRWDTLSL 71

Query: 198 PISKNGIGVRRLTDVIKAYSCKLWWKL 278
                G+GV RL +   A   K  W+L
Sbjct: 72  RKEYGGLGVTRLREFNIALVGKWCWRL 98


>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/94 (31%), Positives = 48/94 (51%)
 Frame = +3

Query: 3    RLFLPGGRLILVRHVLQSMPIYTMATMNPPQAVLWHFESKFSKFFWGSTDASPRRVWRSW 182
            R    GG+ +L++ V  +MP++ M+    P     + ES  + F+W S D S +  W+SW
Sbjct: 745  RCLSQGGKEVLLKSVALAMPVFAMSCFKLPITTCENLESAMASFWWDSCDHSRKIHWQSW 804

Query: 183  EKLVFPISKNGIGVRRLTDVIKAYSCKLWWKLQH 284
            E+L  P    G+G R +    +A   K  W+L H
Sbjct: 805  ERLCLPKDSGGLGFRDIQSFNQALLAKQAWRLLH 838


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