BLASTX nr result

ID: Cephaelis21_contig00047027 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00047027
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containi...   132   3e-29
emb|CBI38763.3| unnamed protein product [Vitis vinifera]              132   3e-29
ref|XP_002511804.1| pentatricopeptide repeat-containing protein,...   124   6e-27
ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   116   2e-24
ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24

>ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score =  132 bits (332), Expect = 3e-29
 Identities = 59/98 (60%), Positives = 74/98 (75%)
 Frame = -3

Query: 295 KPNQFTLGSILRICSIKGLLLQGKQIHGYATRTDFGTNVYVITGLIDMYAKCFSAVEAEF 116
           +PNQFT GS+LR+CS+  LL +GKQIH +A +T F +N +V+TGL+DMYAKC   +EAE+
Sbjct: 135 RPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEY 194

Query: 115 LFEMMPSGRNHVTWTAMINGYSLNGDALKTIHCFEGMR 2
           LFE+ P  RNHV WTAM+ GYS NGD  K I CF  MR
Sbjct: 195 LFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMR 232



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/84 (34%), Positives = 50/84 (59%)
 Frame = -3

Query: 292 PNQFTLGSILRICSIKGLLLQGKQIHGYATRTDFGTNVYVITGLIDMYAKCFSAVEAEFL 113
           P+Q  + ++L  C+   +L  GKQ+H    ++  G+++ V   L+ MYAKC    +A  +
Sbjct: 440 PDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIEDANKV 499

Query: 112 FEMMPSGRNHVTWTAMINGYSLNG 41
           F+ M   ++ +TWTA+I GY+ NG
Sbjct: 500 FDSMEI-QDVITWTALIVGYAQNG 522



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/95 (36%), Positives = 47/95 (49%)
 Frame = -3

Query: 289 NQFTLGSILRICSIKGLLLQGKQIHGYATRTDFGTNVYVITGLIDMYAKCFSAVEAEFLF 110
           NQFT  SIL  C        G Q+HG   R+ FG NV+V + L+DMY+KC     A  + 
Sbjct: 239 NQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRML 298

Query: 109 EMMPSGRNHVTWTAMINGYSLNGDALKTIHCFEGM 5
           E M    + V+W +MI G    G   + +  F  M
Sbjct: 299 ETMEVD-DPVSWNSMIVGCVRQGLGEEALSLFRIM 332


>emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  132 bits (332), Expect = 3e-29
 Identities = 59/98 (60%), Positives = 74/98 (75%)
 Frame = -3

Query: 295 KPNQFTLGSILRICSIKGLLLQGKQIHGYATRTDFGTNVYVITGLIDMYAKCFSAVEAEF 116
           +PNQFT GS+LR+CS+  LL +GKQIH +A +T F +N +V+TGL+DMYAKC   +EAE+
Sbjct: 135 RPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKCILEAEY 194

Query: 115 LFEMMPSGRNHVTWTAMINGYSLNGDALKTIHCFEGMR 2
           LFE+ P  RNHV WTAM+ GYS NGD  K I CF  MR
Sbjct: 195 LFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMR 232



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/95 (36%), Positives = 47/95 (49%)
 Frame = -3

Query: 289 NQFTLGSILRICSIKGLLLQGKQIHGYATRTDFGTNVYVITGLIDMYAKCFSAVEAEFLF 110
           NQFT  SIL  C        G Q+HG   R+ FG NV+V + L+DMY+KC     A  + 
Sbjct: 239 NQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRML 298

Query: 109 EMMPSGRNHVTWTAMINGYSLNGDALKTIHCFEGM 5
           E M    + V+W +MI G    G   + +  F  M
Sbjct: 299 ETMEVD-DPVSWNSMIVGCVRQGLGEEALSLFRIM 332


>ref|XP_002511804.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548984|gb|EEF50473.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 607

 Score =  124 bits (312), Expect = 6e-27
 Identities = 54/98 (55%), Positives = 71/98 (72%)
 Frame = -3

Query: 295 KPNQFTLGSILRICSIKGLLLQGKQIHGYATRTDFGTNVYVITGLIDMYAKCFSAVEAEF 116
           +PN +TLGSILR+CS  G L +G++IHGYA +T    NV+V+T L+D+YAKC    EAE+
Sbjct: 116 RPNHYTLGSILRLCSRTGFLQKGERIHGYAIKTRLDANVFVVTSLVDLYAKCECISEAEY 175

Query: 115 LFEMMPSGRNHVTWTAMINGYSLNGDALKTIHCFEGMR 2
           +FEM+   +NH TWTAM+ GYS NGD  + I CF  MR
Sbjct: 176 IFEMVADSKNHATWTAMLTGYSHNGDGFRAIKCFRDMR 213



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/96 (30%), Positives = 55/96 (57%)
 Frame = -3

Query: 292 PNQFTLGSILRICSIKGLLLQGKQIHGYATRTDFGTNVYVITGLIDMYAKCFSAVEAEFL 113
           P+Q  L S+L  C+   +   G+Q+H    ++   +++ +   L+ MYAKC    +A ++
Sbjct: 421 PDQIVLASVLSACAELTVTEFGQQVHATILKSGLCSSLSIDNSLVTMYAKCGGIEDANYV 480

Query: 112 FEMMPSGRNHVTWTAMINGYSLNGDALKTIHCFEGM 5
           F+ M   R+ ++WTA+I GY+ NG    ++H ++ M
Sbjct: 481 FDSMQI-RDVISWTALIVGYAQNGRGKDSLHFYDQM 515



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/95 (36%), Positives = 48/95 (50%)
 Frame = -3

Query: 289 NQFTLGSILRICSIKGLLLQGKQIHGYATRTDFGTNVYVITGLIDMYAKCFSAVEAEFLF 110
           NQFT  SIL  C      + G Q+HG   R+ FG N++V + L+DMYAKC     A  + 
Sbjct: 220 NQFTFPSILTACGAVSDHVFGVQVHGCIVRSGFGANIFVQSALVDMYAKCRDLNSANRVL 279

Query: 109 EMMPSGRNHVTWTAMINGYSLNGDALKTIHCFEGM 5
           E M    + V+W +MI G    G   + +  F  M
Sbjct: 280 ENM-EVNDVVSWNSMIVGCVREGFEAEALSLFNEM 313


>ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  116 bits (290), Expect = 2e-24
 Identities = 52/98 (53%), Positives = 70/98 (71%)
 Frame = -3

Query: 295 KPNQFTLGSILRICSIKGLLLQGKQIHGYATRTDFGTNVYVITGLIDMYAKCFSAVEAEF 116
           KP+Q+TLGS+LR CS   LL  GK IH YA +     N++V TGL+DMY+KC   +EAE+
Sbjct: 131 KPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEY 190

Query: 115 LFEMMPSGRNHVTWTAMINGYSLNGDALKTIHCFEGMR 2
           LF  +P  +N+V WTAM+ GY+ NG++LK I CF+ MR
Sbjct: 191 LFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMR 228



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
 Frame = -3

Query: 289 NQFTLGSILRICSIKGLLLQGKQIHGYATRTDFGTNVYVITGLIDMYAKCFSAVEAEFLF 110
           N FT  SIL  C+       G+Q+HG    + FG NVYV + L+DMYAKC     A  + 
Sbjct: 235 NHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMIL 294

Query: 109 EMMPSGRNHVTWTAMINGYSLNG---DALKTIH 20
           + M    + V W +MI G   +G   +AL   H
Sbjct: 295 DTMEID-DVVCWNSMIVGCVTHGYMEEALVLFH 326


>ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  116 bits (290), Expect = 2e-24
 Identities = 52/98 (53%), Positives = 70/98 (71%)
 Frame = -3

Query: 295 KPNQFTLGSILRICSIKGLLLQGKQIHGYATRTDFGTNVYVITGLIDMYAKCFSAVEAEF 116
           KP+Q+TLGS+LR CS   LL  GK IH YA +     N++V TGL+DMY+KC   +EAE+
Sbjct: 131 KPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKCLLEAEY 190

Query: 115 LFEMMPSGRNHVTWTAMINGYSLNGDALKTIHCFEGMR 2
           LF  +P  +N+V WTAM+ GY+ NG++LK I CF+ MR
Sbjct: 191 LFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMR 228



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
 Frame = -3

Query: 289 NQFTLGSILRICSIKGLLLQGKQIHGYATRTDFGTNVYVITGLIDMYAKCFSAVEAEFLF 110
           N FT  SIL  C+       G+Q+HG    + FG NVYV + L+DMYAKC     A  + 
Sbjct: 235 NHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGPNVYVQSALVDMYAKCGDLASARMIL 294

Query: 109 EMMPSGRNHVTWTAMINGYSLNG---DALKTIH 20
           + M    + V W +MI G   +G   +AL   H
Sbjct: 295 DTMEID-DVVCWNSMIVGCVTHGYMEEALVLFH 326


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