BLASTX nr result

ID: Cephaelis21_contig00046489 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00046489
         (329 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200452.1| putative FBD-associated F-box protein [Arabidop...    85   7e-15
ref|NP_849271.1| putative F-box/FBD/LRR-repeat protein [Arabidop...    82   3e-14
gb|AAF02795.1|AF195115_15 F5I10.18 gene product [Arabidopsis tha...    82   3e-14
ref|XP_002862419.1| F-box family protein [Arabidopsis lyrata sub...    82   3e-14
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    81   8e-14

>ref|NP_200452.1| putative FBD-associated F-box protein [Arabidopsis thaliana]
           gi|75262700|sp|Q9FM90.1|FBD24_ARATH RecName:
           Full=Putative FBD-associated F-box protein At5g56410
           gi|10177840|dbj|BAB11269.1| unnamed protein product
           [Arabidopsis thaliana] gi|332009378|gb|AED96761.1|
           putative FBD-associated F-box protein [Arabidopsis
           thaliana]
          Length = 503

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 45/108 (41%), Positives = 63/108 (58%)
 Frame = -3

Query: 324 IQELDVVVDGLEPFPPLSLPEVVFRCETLVVLKLACHMLVKIPSSFCLPKLKTLYLNRVV 145
           ++EL V     +      LP  ++ C++LV LKL  ++LV +P  FCLP LKTL+L+ V 
Sbjct: 122 VKELSVRFSPFKGKRDALLPTTLYTCKSLVTLKLRENILVDVPHVFCLPSLKTLHLSHVT 181

Query: 144 YENRESVSALISNCLALEDLSVVRNPYDNVRVYRISSPSLKRLKINFV 1
           Y + ES+  L+SNC  LEDL V R   DNVR + +  PSL  L    +
Sbjct: 182 YADEESLQRLLSNCFVLEDLVVERRVGDNVRNFAVIIPSLLSLSFEIL 229


>ref|NP_849271.1| putative F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|122214671|sp|Q3EAE5.1|FDL24_ARATH RecName:
           Full=Putative F-box/FBD/LRR-repeat protein At4g00315
           gi|332656456|gb|AEE81856.1| putative
           F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
          Length = 441

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/90 (43%), Positives = 59/90 (65%)
 Frame = -3

Query: 279 PLSLPEVVFRCETLVVLKLACHMLVKIPSSFCLPKLKTLYLNRVVYENRESVSALISNCL 100
           P  LP+ +++C+++V+LKL   +LV +P   CLP LKTL+L RV Y + +S+  L+SNC 
Sbjct: 122 PTKLPKSLYKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVTYSDEDSLHRLLSNCP 181

Query: 99  ALEDLSVVRNPYDNVRVYRISSPSLKRLKI 10
            LEDL V R+  DN+    +   SL+RL +
Sbjct: 182 VLEDLVVERDRIDNLGKLSVVVKSLQRLTL 211


>gb|AAF02795.1|AF195115_15 F5I10.18 gene product [Arabidopsis thaliana]
           gi|2252838|gb|AAB62837.1| A_IG005I10.18 gene product
           [Arabidopsis thaliana] gi|7267119|emb|CAB80790.1|
           AT4g00320 [Arabidopsis thaliana]
          Length = 773

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 39/90 (43%), Positives = 59/90 (65%)
 Frame = -3

Query: 279 PLSLPEVVFRCETLVVLKLACHMLVKIPSSFCLPKLKTLYLNRVVYENRESVSALISNCL 100
           P  LP+ +++C+++V+LKL   +LV +P   CLP LKTL+L RV Y + +S+  L+SNC 
Sbjct: 122 PTKLPKSLYKCKSIVILKLKDEILVDVPRKVCLPSLKTLFLGRVTYSDEDSLHRLLSNCP 181

Query: 99  ALEDLSVVRNPYDNVRVYRISSPSLKRLKI 10
            LEDL V R+  DN+    +   SL+RL +
Sbjct: 182 VLEDLVVERDRIDNLGKLSVVVKSLQRLTL 211


>ref|XP_002862419.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297307922|gb|EFH38677.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 534

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 46/107 (42%), Positives = 61/107 (57%)
 Frame = -3

Query: 321 QELDVVVDGLEPFPPLSLPEVVFRCETLVVLKLACHMLVKIPSSFCLPKLKTLYLNRVVY 142
           QEL V     +      LP  ++ C++LV LKL  ++LV +P  FCLP LKTL+L R+ Y
Sbjct: 121 QELSVSYSPYKGKRDALLPTSLYTCKSLVTLKLRDNILVDVPHVFCLPSLKTLHLVRMTY 180

Query: 141 ENRESVSALISNCLALEDLSVVRNPYDNVRVYRISSPSLKRLKINFV 1
            + ES+  L+SNC  LEDL V R   DNVR   +  PSL  L    +
Sbjct: 181 ADEESLQRLLSNCFVLEDLVVERRVGDNVRNVSVIIPSLLSLSFEIL 227


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 45/110 (40%), Positives = 68/110 (61%), Gaps = 2/110 (1%)
 Frame = -3

Query: 327 QIQELDV--VVDGLEPFPPLSLPEVVFRCETLVVLKLACHMLVKIPSSFCLPKLKTLYLN 154
           ++QELD+  ++D     PP+      F C+TLVV+KL+C + + IP++  LP LK L+L 
Sbjct: 117 RVQELDLHLLIDWRVELPPM-----FFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLK 171

Query: 153 RVVYENRESVSALISNCLALEDLSVVRNPYDNVRVYRISSPSLKRLKINF 4
            V Y + +S+  L+S C  LE+L + R   DN  V  +S+PSLK L+I F
Sbjct: 172 SVEYSDDDSIQKLLSGCPVLEELVIEREERDNQWVVNVSNPSLKILRIFF 221


Top