BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00046413
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC67331.1| putative non-LTR retroelement reverse transcripta...    70   1e-10
gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]               62   4e-08
dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thal...    62   4e-08
ref|NP_174931.1| endonuclease/exonuclease/phosphatase domain-con...    60   1e-07
gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thali...    59   4e-07

>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1449

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
 Frame = +3

Query: 3   RVLWNDLLSLMSD--VGDRPWLLAGDFNVISSIDEYIG----PSVSQDLGSISEFQDFLN 164
           ++LWNDL   M    + D+PW++ GDFN I  +DE+      P+V+  +    +FQ  +N
Sbjct: 532 KILWNDLRDHMDSPIIRDKPWIIFGDFNEILDMDEHSRMEDHPAVTSGM---RDFQSLVN 588

Query: 165 DGAFSEFPVSGEIFTWTGMRQGGRVWKKLDRIVAN 269
             +FS+    G +FTW   R    +WKKLDR++ N
Sbjct: 589 YCSFSDLASHGPLFTWCNKRDNDPIWKKLDRVMVN 623


>gb|AAD32866.1|AC005489_4 F14N23.4 [Arabidopsis thaliana]
          Length = 1161

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
 Frame = +3

Query: 3   RVLWNDLLSLM--SDVGDRPWLLAGDFNVISSIDEYIGPSVSQDLGSISEFQDF---LND 167
           R LW D+L L   S +   PWLL GDFN I++  E+   S++Q L ++   +D    L D
Sbjct: 160 RSLWEDILVLSRTSPLSVTPWLLLGDFNQIAAASEHY--SINQSLLNLRGMEDLQCCLRD 217

Query: 168 GAFSEFPVSGEIFTWTGMRQGGRVWKKLDRIVAN 269
              S+ P  G  FTW+  +Q   + +KLDR +AN
Sbjct: 218 SQLSDLPSRGVFFTWSNHQQDNPILRKLDRALAN 251


>dbj|BAF00918.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 910

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
 Frame = +3

Query: 3   RVLWNDLLSLM--SDVGDRPWLLAGDFNVISSIDEYIGPSVSQDLGSISEFQDF---LND 167
           R LW D+L L   S +   PWLL GDFN I++  E+   S++Q L ++   +D    L D
Sbjct: 117 RSLWEDILVLSRTSPLSVTPWLLLGDFNQIAAASEHY--SINQSLLNLRGMEDLQCCLRD 174

Query: 168 GAFSEFPVSGEIFTWTGMRQGGRVWKKLDRIVAN 269
              S+ P  G  FTW+  +Q   + +KLDR +AN
Sbjct: 175 SQLSDLPSRGVFFTWSNHQQDNPILRKLDRALAN 208


>ref|NP_174931.1| endonuclease/exonuclease/phosphatase domain-containing protein
           [Arabidopsis thaliana] gi|332193787|gb|AEE31908.1|
           endonuclease/exonuclease/phosphatase domain-containing
           protein [Arabidopsis thaliana]
          Length = 426

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/92 (33%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
 Frame = +3

Query: 3   RVLWNDL--LSLMSDVGDRPWLLAGDFNVISSIDEYIGPSVSQ-DLGSISEFQDFLNDGA 173
           R LW+D+  LS  S + + PWL+ GDFN I+S+ E+     S   L  + + Q  + D  
Sbjct: 102 RSLWDDITRLSASSPLCNSPWLVVGDFNQIASVTEHYSLMPSNISLQGLEDLQACMRDSD 161

Query: 174 FSEFPVSGEIFTWTGMRQGGRVWKKLDRIVAN 269
             + P  G ++TW+  +Q   + +KLDR + N
Sbjct: 162 LVDLPCRGVLYTWSNHQQDNPILRKLDRAIVN 193


>gb|AAD08951.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|20197043|gb|AAM14892.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 1412

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
 Frame = +3

Query: 9   LWNDLLSLMSDVG--DRPWLLAGDFNVISSIDEYIGPSVSQDLG-SISEFQDFLNDGAFS 179
           LW DL +L + V   ++PWLL GDFN    ++E+   +VS  +   + +FQ  +   +  
Sbjct: 421 LWQDLHNLQNSVAFRNKPWLLFGDFNETLKMEEHSSYAVSPMVTPGMRDFQIVVRYCSLE 480

Query: 180 EFPVSGEIFTWTGMRQGGRVWKKLDRIVANP 272
           +    G +FTW   R  G + KKLDR++ NP
Sbjct: 481 DMRTHGPLFTWGNKRNEGLICKKLDRVLLNP 511