BLASTX nr result

ID: Cephaelis21_contig00046405 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00046405
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC44142.1| putative polyprotein [Cicer arietinum]                170   1e-40
gb|ABN08587.1| Polynucleotidyl transferase, Ribonuclease H fold ...   164   9e-39
gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]              163   1e-38
gb|ABD28293.1| RNA-directed DNA polymerase (Reverse transcriptas...   162   3e-38
gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]                 161   6e-38

>emb|CAC44142.1| putative polyprotein [Cicer arietinum]
          Length = 655

 Score =  170 bits (430), Expect = 1e-40
 Identities = 85/147 (57%), Positives = 112/147 (76%), Gaps = 4/147 (2%)
 Frame = +2

Query: 2   SKEGLGCVLMQYEKVVAHAT*KLKLHEQNYPTNDLELEAVVFALKKWRHYLYGITFEVFT 181
           S +GLGCVLMQ++KVVA+A+ +LK+HE+NYPT+DLEL AVVFALK WRHYLYG TF VF+
Sbjct: 123 SHQGLGCVLMQHKKVVAYASRQLKIHERNYPTHDLELAAVVFALKIWRHYLYGCTFTVFS 182

Query: 182 DHQSLKYLYSQKELNIRQRRWVKFLQDYNGTMNYHSGKANVVMNAFSRK--VKMALLMVR 355
           DH+SLKYL+ QKELN+RQRRW++ L+D++ T+ YH GKANVV +A SR+     +L+M R
Sbjct: 183 DHKSLKYLFDQKELNMRQRRWIETLKDFDFTLQYHPGKANVVADALSRRSVSVSSLIMAR 242

Query: 356 EMSLLQVLSEWKSRVE--SGTIVFGNI 430
           +  L +   +    VE   G + FG I
Sbjct: 243 QQELWEAFRDLHLNVEFAPGILKFGMI 269


>gb|ABN08587.1| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 482

 Score =  164 bits (414), Expect = 9e-39
 Identities = 82/125 (65%), Positives = 103/125 (82%), Gaps = 1/125 (0%)
 Frame = +2

Query: 2   SKEGLGCVLMQYEKVVAHAT*KLKLHEQNYPTNDLELEAVVFALKKWRHYLYGITFEVFT 181
           SK GLG VLMQ  KVVA+A+ +L+++E+NYPT+DLEL AVVF LK WRHYLYG  FEVF+
Sbjct: 72  SKLGLGGVLMQDGKVVAYASRQLRIYEKNYPTHDLELAAVVFVLKIWRHYLYGSRFEVFS 131

Query: 182 DHQSLKYLYSQKELNIRQRRWVKFLQDYNGTMNYHSGKANVVMNAFSRK-VKMALLMVRE 358
           DH+SLKYL+ QKELN+RQRRW++ L+DY+  +NYH GKANVV +A SRK + M+ LMVRE
Sbjct: 132 DHKSLKYLFDQKELNMRQRRWLELLKDYDFGLNYHPGKANVVADALSRKTLHMSALMVRE 191

Query: 359 MSLLQ 373
             LL+
Sbjct: 192 FELLE 196


>gb|ABG37663.1| CCHC-type integrase [Populus trichocarpa]
          Length = 2037

 Score =  163 bits (413), Expect = 1e-38
 Identities = 74/120 (61%), Positives = 101/120 (84%)
 Frame = +2

Query: 2    SKEGLGCVLMQYEKVVAHAT*KLKLHEQNYPTNDLELEAVVFALKKWRHYLYGITFEVFT 181
            S+ GLGCVLMQ+ KV+A+A+ +LK HEQNYPT+DLE+ AV+FALK WRHYLYG T E+FT
Sbjct: 1795 SRVGLGCVLMQHGKVIAYASRQLKKHEQNYPTHDLEMTAVIFALKIWRHYLYGETCEIFT 1854

Query: 182  DHQSLKYLYSQKELNIRQRRWVKFLQDYNGTMNYHSGKANVVMNAFSRKVKMALLMVREM 361
            DH+SLKY++ Q++LN+RQRRW++ L+DY+ T++YH GKANVV +A SRK   +L  ++E+
Sbjct: 1855 DHKSLKYIFQQRDLNLRQRRWMELLKDYDCTIHYHPGKANVVADALSRKSSGSLAHIQEV 1914


>gb|ABD28293.1| RNA-directed DNA polymerase (Reverse transcriptase); Zinc finger,
            CCHC-type; Peptidase aspartic, active site;
            Retrotransposon gag protein [Medicago truncatula]
          Length = 912

 Score =  162 bits (409), Expect = 3e-38
 Identities = 81/124 (65%), Positives = 101/124 (81%), Gaps = 1/124 (0%)
 Frame = +2

Query: 2    SKEGLGCVLMQYEKVVAHAT*KLKLHEQNYPTNDLELEAVVFALKKWRHYLYGITFEVFT 181
            SK GLG VLMQ  KVVA+A+ +L++HE+NYPT+DLEL AVVF LK WRHYLYG  FEVF+
Sbjct: 778  SKLGLGGVLMQEGKVVAYASRQLRIHEKNYPTHDLELAAVVFVLKIWRHYLYGSRFEVFS 837

Query: 182  DHQSLKYLYSQKELNIRQRRWVKFLQDYNGTMNYHSGKANVVMNAFSRK-VKMALLMVRE 358
            D +SLKYL+ QKELN+RQRRW++ L+DY+  +NYH GKANVV +A SRK + M+ +MVRE
Sbjct: 838  DQKSLKYLFDQKELNMRQRRWLELLKDYDFGLNYHPGKANVVADALSRKTLHMSAMMVRE 897

Query: 359  MSLL 370
              LL
Sbjct: 898  FELL 901


>gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]
          Length = 923

 Score =  161 bits (407), Expect = 6e-38
 Identities = 82/139 (58%), Positives = 105/139 (75%), Gaps = 1/139 (0%)
 Frame = +2

Query: 2   SKEGLGCVLMQYEKVVAHAT*KLKLHEQNYPTNDLELEAVVFALKKWRHYLYGITFEVFT 181
           SK+GLGCVLMQ  KVVA+A+ +LK HEQNYPT+DLEL AVVFALK WRHYLYG   ++FT
Sbjct: 296 SKKGLGCVLMQQGKVVAYASRQLKSHEQNYPTHDLELAAVVFALKIWRHYLYGEKIQIFT 355

Query: 182 DHQSLKYLYSQKELNIRQRRWVKFLQDYNGTMNYHSGKANVVMNAFSRKVK-MALLMVRE 358
           DH+SLKY ++QKELN+RQRRW++ ++DY+  + YH GKANVV +A SRKV   A L+ R+
Sbjct: 356 DHKSLKYFFTQKELNMRQRRWLELVKDYDCEILYHPGKANVVADALSRKVSHSAALITRQ 415

Query: 359 MSLLQVLSEWKSRVESGTI 415
             L + L   +  V  G +
Sbjct: 416 APLHRDLERAEIAVLVGAV 434


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