BLASTX nr result

ID: Cephaelis21_contig00046398 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00046398
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301657.1| predicted protein [Populus trichocarpa] gi|2...   216   2e-54
ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containi...   205   3e-51
emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]   204   8e-51
ref|NP_188050.1| pentatricopeptide repeat-containing protein [Ar...   198   4e-49
dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana]        198   4e-49

>ref|XP_002301657.1| predicted protein [Populus trichocarpa] gi|222843383|gb|EEE80930.1|
           predicted protein [Populus trichocarpa]
          Length = 504

 Score =  216 bits (549), Expect = 2e-54
 Identities = 102/143 (71%), Positives = 120/143 (83%)
 Frame = -2

Query: 429 LFVRMVTDFGIGPNIEHYACLVNLLGRAGRIQEALKIVKCMPMKPSGSIWGSLLNACRLH 250
           LF RM  DFG+ P++EHYACLV++LGRAGRI  AL +VK MPMK SGSIWGSLLN+CRLH
Sbjct: 254 LFHRMEMDFGVSPSLEHYACLVDMLGRAGRIDAALVVVKNMPMKTSGSIWGSLLNSCRLH 313

Query: 249 NDISNAEFIANQLFEIEPENSGNYVMLSNIYAKAGMWKGVNTVRDMMEEKGIKKEAGCSW 70
           N++  AE IAN+LFE+EP N GNYVMLSNIYA AGMW  VN VR+MM+ + I+KEAGCSW
Sbjct: 314 NEVPLAEAIANRLFELEPYNPGNYVMLSNIYANAGMWDSVNMVREMMQTRRIRKEAGCSW 373

Query: 69  IFVKNGLHTFVAGGGAEFRDSDE 1
           I VKN +H+FVAGGG EFR+SDE
Sbjct: 374 IQVKNKIHSFVAGGGFEFRNSDE 396


>ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
           [Vitis vinifera] gi|296088358|emb|CBI36803.3| unnamed
           protein product [Vitis vinifera]
          Length = 652

 Score =  205 bits (522), Expect = 3e-51
 Identities = 94/143 (65%), Positives = 118/143 (82%)
 Frame = -2

Query: 429 LFVRMVTDFGIGPNIEHYACLVNLLGRAGRIQEALKIVKCMPMKPSGSIWGSLLNACRLH 250
           LF  M  D+GI P +EHYACLV++LGRAGRI+EAL+IVK MP KP+GSIWGSLLN+CRLH
Sbjct: 402 LFEMMKMDYGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLH 461

Query: 249 NDISNAEFIANQLFEIEPENSGNYVMLSNIYAKAGMWKGVNTVRDMMEEKGIKKEAGCSW 70
            ++  AE +A +LFE+EP N+GNYVMLSNIYA AGMW+ V  VR+ ME++G+ KEAGCSW
Sbjct: 462 GNVPLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSW 521

Query: 69  IFVKNGLHTFVAGGGAEFRDSDE 1
           + +K+ +HTFVAGG  EFR+S E
Sbjct: 522 LQIKSKIHTFVAGGSNEFRNSVE 544


>emb|CAN70930.1| hypothetical protein VITISV_000387 [Vitis vinifera]
          Length = 773

 Score =  204 bits (518), Expect = 8e-51
 Identities = 94/143 (65%), Positives = 117/143 (81%)
 Frame = -2

Query: 429 LFVRMVTDFGIGPNIEHYACLVNLLGRAGRIQEALKIVKCMPMKPSGSIWGSLLNACRLH 250
           LF  M  D GI P +EHYACLV++LGRAGRI+EAL+IVK MP KP+GSIWGSLLN+CRLH
Sbjct: 401 LFEMMKMDHGISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLH 460

Query: 249 NDISNAEFIANQLFEIEPENSGNYVMLSNIYAKAGMWKGVNTVRDMMEEKGIKKEAGCSW 70
            ++  AE +A +LFE+EP N+GNYVMLSNIYA AGMW+ V  VR+ ME++G+ KEAGCSW
Sbjct: 461 GNVPLAEAVAKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSW 520

Query: 69  IFVKNGLHTFVAGGGAEFRDSDE 1
           + +K+ +HTFVAGG  EFR+S E
Sbjct: 521 LQIKSKIHTFVAGGSNEFRNSVE 543


>ref|NP_188050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546762|sp|Q9LUL5.2|PP229_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g14330 gi|332641981|gb|AEE75502.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  198 bits (503), Expect = 4e-49
 Identities = 88/144 (61%), Positives = 117/144 (81%)
 Frame = -2

Query: 432 ALFVRMVTDFGIGPNIEHYACLVNLLGRAGRIQEALKIVKCMPMKPSGSIWGSLLNACRL 253
           +LF RM T+F + P +EHYACLV++LGRAG+I+EA+K+++ MP KPS SIWGSLLN+CRL
Sbjct: 459 SLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRL 518

Query: 252 HNDISNAEFIANQLFEIEPENSGNYVMLSNIYAKAGMWKGVNTVRDMMEEKGIKKEAGCS 73
           H ++S  E  A +LF +EP N GNYVM+SNIYA A MW  V+ +R+MM+++G+KKEAGCS
Sbjct: 519 HGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCS 578

Query: 72  WIFVKNGLHTFVAGGGAEFRDSDE 1
           W+ VK+ +  FVAGGG EFR+SDE
Sbjct: 579 WVQVKDKIQIFVAGGGYEFRNSDE 602


>dbj|BAB01039.1| unnamed protein product [Arabidopsis thaliana]
          Length = 717

 Score =  198 bits (503), Expect = 4e-49
 Identities = 88/144 (61%), Positives = 117/144 (81%)
 Frame = -2

Query: 432 ALFVRMVTDFGIGPNIEHYACLVNLLGRAGRIQEALKIVKCMPMKPSGSIWGSLLNACRL 253
           +LF RM T+F + P +EHYACLV++LGRAG+I+EA+K+++ MP KPS SIWGSLLN+CRL
Sbjct: 466 SLFERMKTEFRVSPALEHYACLVDILGRAGKIKEAVKVIETMPFKPSASIWGSLLNSCRL 525

Query: 252 HNDISNAEFIANQLFEIEPENSGNYVMLSNIYAKAGMWKGVNTVRDMMEEKGIKKEAGCS 73
           H ++S  E  A +LF +EP N GNYVM+SNIYA A MW  V+ +R+MM+++G+KKEAGCS
Sbjct: 526 HGNVSVGEIAAKELFVLEPHNPGNYVMVSNIYADAKMWDNVDKIREMMKQRGVKKEAGCS 585

Query: 72  WIFVKNGLHTFVAGGGAEFRDSDE 1
           W+ VK+ +  FVAGGG EFR+SDE
Sbjct: 586 WVQVKDKIQIFVAGGGYEFRNSDE 609


Top