BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00046325
         (703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...   173   3e-41
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...   165   9e-39
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...   163   3e-38
gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...   144   1e-32
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   142   9e-32

>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score =  173 bits (438), Expect = 3e-41
 Identities = 96/228 (42%), Positives = 134/228 (58%), Gaps = 8/228 (3%)
 Frame = -1

Query: 673 GSNTSD--KNCKQFKQCVRQMEMIDLGFNGAKYTWNRGNL-----YERIDRALGNSEFLE 515
           GS +S+  + CK F   +    +IDLGF G  +TW+RG         R+DR L NSE+  
Sbjct: 150 GSESSEMQRRCKDFANWIENNALIDLGFTGPAHTWSRGLSPTTFKSARLDRGLANSEWKL 209

Query: 514 LFSDVQVHHLLRIKSDHRPILIQT-GMEDCTRSRQPFRFIESWLTHPGFEELVNGNWDED 338
            F++  V +L + +SDH PILI T G     R  +PFRF  +WL H  F E V  NW+ D
Sbjct: 210 KFTEGVVRNLPKSQSDHCPILISTSGFAPVPRIIKPFRFQAAWLNHQVFCEFVRKNWNAD 269

Query: 337 GEIIANIKQFSEAAERWNREVFGHIVQRKNRTLARIKGLQEALDRKPSRYLHKLEEELRS 158
             I+  +K F++   +WN+E F +I ++K+   ARI G+Q  L      +L KLE +LR 
Sbjct: 270 APIVPFLKSFADKLNKWNKEEFYNIFRKKSELWARISGVQALLSTGRQNHLIKLEAKLRR 329

Query: 157 ELENILDQEESLWRQKARCDWIMLGDRNTKYFHSKTKARRRRNSINSL 14
           E++ +LD EE+LW QK+R + I  GDRNT+YFH  T  RR RN I+ L
Sbjct: 330 EMDIVLDDEETLWFQKSRMEAICDGDRNTRYFHLSTVIRRSRNRIDML 377


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score =  165 bits (417), Expect = 9e-39
 Identities = 95/235 (40%), Positives = 127/235 (54%), Gaps = 6/235 (2%)
 Frame = -1

Query: 700 ILESWEKIGGSNTSDKNCKQFKQCVRQMEMIDLGFNGAKYTWNRGN-----LYERIDRAL 536
           +L   EK+GG     +  KQ K  +    ++DLGF G K+TW  G      + ER+DRAL
Sbjct: 143 VLHGNEKMGGRQVGKEQGKQCKDWIAANALLDLGFQGPKFTWTNGRTGGSLIKERLDRAL 202

Query: 535 GNSEFLELFSDVQVHHLLRIKSDHRPILIQTGMEDCTRSRQPFRFIESWLTHPGFEELVN 356
            NSE+L+LF D +V HL R  SDH P+LI    E+      PFR  E W  HP F  ++ 
Sbjct: 203 VNSEWLDLFPDTKVIHLPRTFSDHCPLLILFN-ENPRSESFPFRCKEVWAYHPDFTNVIE 261

Query: 355 GNW-DEDGEIIANIKQFSEAAERWNREVFGHIVQRKNRTLARIKGLQEALDRKPSRYLHK 179
             W       +A    F  + + W++ VFG I Q+K R LAR+ G+Q++L   PS +L K
Sbjct: 262 ETWGSHHNSYVAARDLFLSSVKSWSKYVFGSIFQKKKRILARLGGIQKSLSIHPSVFLSK 321

Query: 178 LEEELRSELENILDQEESLWRQKARCDWIMLGDRNTKYFHSKTKARRRRNSINSL 14
           LE +L  EL  +  QE   W QKA  D   LGD NTKYFH+  K R  +  I+ L
Sbjct: 322 LEIDLLVELNELSKQERVFWAQKAGIDRAKLGDMNTKYFHTLAKIRTCKRKISCL 376


>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 855

 Score =  163 bits (413), Expect = 3e-38
 Identities = 89/206 (43%), Positives = 121/206 (58%), Gaps = 8/206 (3%)
 Frame = -1

Query: 607  DLGFNGAKYTWNRGNLY-----ERIDRALGNSEFLELFSDVQVHHLLRIKSDHRPILIQT 443
            D+GF G K+TW RG +      +R+DR L   +    + +  V HL    SDH PI IQ 
Sbjct: 585  DMGFKGNKFTWKRGRVESTFVAKRLDRVLCRPQTRLKWQEASVTHLPFFASDHAPIYIQ- 643

Query: 442  GMEDCTRS---RQPFRFIESWLTHPGFEELVNGNWDEDGEIIANIKQFSEAAERWNREVF 272
             +E   RS   R+PFRF  +WLTH GF++L+  +W+ +GE    +       ++WNREVF
Sbjct: 644  -LEPEVRSNPLRRPFRFEAAWLTHSGFKDLLQASWNTEGETPVALAALKSKLKKWNREVF 702

Query: 271  GHIVQRKNRTLARIKGLQEALDRKPSRYLHKLEEELRSELENILDQEESLWRQKARCDWI 92
            G + +RK   +  IK +QE L+   +  L   EEEL  E + +L+QEE LW QK+R  W+
Sbjct: 703  GDVNRRKESLMNEIKVVQELLEINQTDNLLSKEEELIKEFDVVLEQEEVLWFQKSREKWV 762

Query: 91   MLGDRNTKYFHSKTKARRRRNSINSL 14
             LGDRNTKYFH+ T  RRRRN I  L
Sbjct: 763  ELGDRNTKYFHTMTVVRRRRNRIEML 788


>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
           [Medicago truncatula]
          Length = 1296

 Score =  144 bits (364), Expect = 1e-32
 Identities = 78/215 (36%), Positives = 124/215 (57%), Gaps = 6/215 (2%)
 Frame = -1

Query: 640 FKQCVRQMEMIDLGFNGAKYTWNRGN-----LYERIDRALGNSEFLELFSDVQVHHLLRI 476
           F   +    ++DL   G ++TW++ N     L +++DR + N ++   F +  V  L R+
Sbjct: 160 FSNFMNNCNLLDLTTTGGRFTWHKNNNGIRILSKKLDRGMANVDWRLSFPEAFVEVLCRL 219

Query: 475 KSDHRPILIQTGMEDCTRSRQPFRFIESWLTHPGFEELVNGNWD-EDGEIIANIKQFSEA 299
            SDH P+L++ G    TR  +PFRF  +W+ H  +  +V  +W        A++ +  E 
Sbjct: 220 HSDHNPLLLRFGGLPLTRGPRPFRFEAAWIDHYDYGNVVKRSWSTHTHNPTASLIKVMEN 279

Query: 298 AERWNREVFGHIVQRKNRTLARIKGLQEALDRKPSRYLHKLEEELRSELENILDQEESLW 119
           +  +N +VFG+I QRK+R   R+KG+Q  L+R  S     LE+EL+ E  +IL QEE LW
Sbjct: 280 SIIFNHDVFGNIFQRKSRVEWRLKGVQSYLERVDSYRHTLLEKELQDEYNHILFQEEMLW 339

Query: 118 RQKARCDWIMLGDRNTKYFHSKTKARRRRNSINSL 14
            QK+R  W+ LGD+NT +FH++T  RR+ N I+ L
Sbjct: 340 YQKSREQWVKLGDKNTAFFHAQTVIRRKWNKIHKL 374


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  142 bits (357), Expect = 9e-32
 Identities = 84/235 (35%), Positives = 128/235 (54%), Gaps = 8/235 (3%)
 Frame = -1

Query: 685 EKIGGSNTSDKNCKQFKQCVRQMEMIDLGFNGAKYTWNRGN-----LYERIDRALGNSEF 521
           EK GG+   ++    F++ +    + DLG+ G ++TW RGN     + ER+DR L N E+
Sbjct: 146 EKEGGAPRCERVMDAFREVIDDCAVKDLGYVGNRFTWQRGNSPSTLIRERLDRMLANDEW 205

Query: 520 LELFSDVQVHHLLRIKSDHRPILIQTGMEDC-TRSRQPFRFIESWLTHPGFEELVNGNWD 344
            + F   +V HL R +SDH P+L++TG+ D   R  + F+F   WL+     ++V   W+
Sbjct: 206 CDNFPSWEVVHLPRYRSDHAPLLLKTGVNDSFRRGNKLFKFEAMWLSKEECGKIVEEAWN 265

Query: 343 ED-GEIIAN-IKQFSEAAERWNREVFGHIVQRKNRTLARIKGLQEALDRKPSRYLHKLEE 170
              GE I N + + S +   W  + FG++ +RK   L  + GLQ+   R P     +   
Sbjct: 266 GSAGEDITNRLDEVSRSLSTWATKTFGNLKKRKKEALTLLNGLQQ---RDPDASTLEQCR 322

Query: 169 ELRSELENILDQEESLWRQKARCDWIMLGDRNTKYFHSKTKARRRRNSINSLLVE 5
            +  +L+ I   EES W  +AR + I  GD+NTKYFH K   R+RRN+IN LL E
Sbjct: 323 IVSGDLDEIHRLEESYWHARARANEIRDGDKNTKYFHHKASQRKRRNTINELLDE 377