BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00046029
         (590 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...   191   1e-46
gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis ...   185   4e-45
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...   184   7e-45
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...   183   2e-44
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...   169   2e-40

>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score =  191 bits (484), Expect = 1e-46
 Identities = 90/194 (46%), Positives = 129/194 (66%)
 Frame = +2

Query: 5   RFVKVIIECVTNSTMRILWNGEITEPFTPSRGIRQGDPISPNLFVLCMERLGQLIASKCG 184
           + + +I  C++  + +I+WNG+ +E F PSRGIRQGDP+SP LFV+CMERL  +IA +  
Sbjct: 31  KLINIIHHCISTPSYKIMWNGDKSESFYPSRGIRQGDPLSPYLFVICMERLSHIIADQVE 90

Query: 185 ANKWEPFQVPNKGPRISHLFFADDLVLFCRATTEQANVINEVLKVFMEHSGLKANKLKTK 364
           A+ W+P +    GP ISHL FADDL+LF  A+ EQA+ +   L +F + SG K N+ KT+
Sbjct: 91  ADYWKPMRAGRYGPPISHLLFADDLLLFAEASIEQAHCVLHCLDMFCQSSGQKINREKTQ 150

Query: 365 LFFSKNVPEAVMDDISNTLGFQRVEDLGAYLGVPLLHKRVTRGTYQFIVERVSQKLNGWP 544
           ++FSKNV   + +DI    GF +V  LG YLG  +   R +RG +  I+ ++  KL+GW 
Sbjct: 151 VYFSKNVDNHLREDIIQHTGFNQVNSLGKYLGANITPGRTSRGHFNHIINKIQNKLSGWK 210

Query: 545 VRQLSFAGRITLAK 586
            + LS AGRITL+K
Sbjct: 211 QQCLSLAGRITLSK 224


>gb|ABW81175.1| non-LTR retrotransposon transposase [Arabidopsis cebennensis]
          Length = 799

 Score =  185 bits (470), Expect = 4e-45
 Identities = 92/194 (47%), Positives = 127/194 (65%)
 Frame = +2

Query: 8   FVKVIIECVTNSTMRILWNGEITEPFTPSRGIRQGDPISPNLFVLCMERLGQLIASKCGA 187
           ++  I++CV    M +LWNGE TE F PSRG+RQGDP+SP LFVLC+ERL   I    G 
Sbjct: 57  WINWIMKCVKEPAMTVLWNGEKTESFIPSRGLRQGDPLSPYLFVLCLERLCHQIDLAVGT 116

Query: 188 NKWEPFQVPNKGPRISHLFFADDLVLFCRATTEQANVINEVLKVFMEHSGLKANKLKTKL 367
            +W+P  +   GP +SH+ FADDL+LF  A+  Q  V+ +VL+ F   SG K +  K+K+
Sbjct: 117 KEWKPISMSRGGPLLSHICFADDLILFAEASVAQIRVVRKVLEKFCIASGQKVSLEKSKI 176

Query: 368 FFSKNVPEAVMDDISNTLGFQRVEDLGAYLGVPLLHKRVTRGTYQFIVERVSQKLNGWPV 547
           FFS+NV   +   IS+  G +  ++LG YLG+P+L KR+ + T+  I+ RVS +L GW  
Sbjct: 177 FFSQNVHRDLEKFISDESGIKSTKELGKYLGMPVLQKRINKDTFGEILLRVSSRLAGWKG 236

Query: 548 RQLSFAGRITLAKS 589
           R LS AGR+TL KS
Sbjct: 237 RMLSLAGRLTLTKS 250


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score =  184 bits (468), Expect = 7e-45
 Identities = 88/193 (45%), Positives = 126/193 (65%)
 Frame = +2

Query: 11   VKVIIECVTNSTMRILWNGEITEPFTPSRGIRQGDPISPNLFVLCMERLGQLIASKCGAN 190
            V +++ CV+++ ++ILWNGE  E   P+RG+RQGDP+SP L+V+CMERL  LI  +    
Sbjct: 609  VDIVMNCVSSANLQILWNGEPMEKICPTRGLRQGDPLSPYLYVICMERLAHLIDQEVTNG 668

Query: 191  KWEPFQVPNKGPRISHLFFADDLVLFCRATTEQANVINEVLKVFMEHSGLKANKLKTKLF 370
             W+P +    GP IS+L FADDL+LF  A+ EQA V+   L  F E SG K N+ K+K++
Sbjct: 669  NWKPVKASRNGPPISNLAFADDLILFSEASVEQAQVMKWCLDRFCEASGSKVNEDKSKIY 728

Query: 371  FSKNVPEAVMDDISNTLGFQRVEDLGAYLGVPLLHKRVTRGTYQFIVERVSQKLNGWPVR 550
            FS N    + D + NTL  +   D G YLGVP ++ R ++  YQ++V+R++ KL GW  +
Sbjct: 729  FSANTHLDIRDAVCNTLAMEATADFGKYLGVPTINGRSSKREYQYLVDRINGKLAGWKTK 788

Query: 551  QLSFAGRITLAKS 589
             LS AGR TL +S
Sbjct: 789  TLSIAGRATLIQS 801


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1231

 Score =  183 bits (465), Expect = 2e-44
 Identities = 92/190 (48%), Positives = 126/190 (66%)
 Frame = +2

Query: 20   IIECVTNSTMRILWNGEITEPFTPSRGIRQGDPISPNLFVLCMERLGQLIASKCGANKWE 199
            I+  VT+ +M +LWNGE T+ F P+RG+RQGDP+SP LFVLC+ERL  LI +  G  +W+
Sbjct: 469  IMAGVTDPSMSVLWNGERTDSFVPARGLRQGDPLSPYLFVLCLERLCHLIEASVGKREWK 528

Query: 200  PFQVPNKGPRISHLFFADDLVLFCRATTEQANVINEVLKVFMEHSGLKANKLKTKLFFSK 379
            P  V   G ++SH+ FADDL+LF  A+  Q  +I  VL+ F E SG K +  K+K+FFS 
Sbjct: 529  PIAVSCGGSKLSHVCFADDLILFAEASVAQIRIIRRVLERFCEASGQKVSLEKSKIFFSH 588

Query: 380  NVPEAVMDDISNTLGFQRVEDLGAYLGVPLLHKRVTRGTYQFIVERVSQKLNGWPVRQLS 559
            NV   +   IS   G    ++LG YLG+P+L KR+ + T+  ++ERVS +L GW  R LS
Sbjct: 589  NVSREMEQLISEESGIGCTKELGKYLGMPILQKRMNKETFGEVLERVSARLAGWKGRSLS 648

Query: 560  FAGRITLAKS 589
             AGRITL K+
Sbjct: 649  LAGRITLTKA 658


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score =  169 bits (429), Expect = 2e-40
 Identities = 88/194 (45%), Positives = 119/194 (61%)
 Frame = +2

Query: 8   FVKVIIECVTNSTMRILWNGEITEPFTPSRGIRQGDPISPNLFVLCMERLGQLIASKCGA 187
           ++K I+ECV    M +LWNGE T+ FTP RG+RQGDPISP LFVLC+ERL   I +  G 
Sbjct: 417 WIKRIMECVAGPEMSLLWNGEKTDSFTPERGLRQGDPISPYLFVLCIERLCHQIETAVGR 476

Query: 188 NKWEPFQVPNKGPRISHLFFADDLVLFCRATTEQANVINEVLKVFMEHSGLKANKLKTKL 367
             W+   +   GP++SH+ FADDL+LF  A+  Q        KV +E         K+K+
Sbjct: 477 GDWKSISISQGGPKVSHVCFADDLILFAEASVAQ--------KVSLE---------KSKI 519

Query: 368 FFSKNVPEAVMDDISNTLGFQRVEDLGAYLGVPLLHKRVTRGTYQFIVERVSQKLNGWPV 547
           FFS NV   +   I+   G     +LG YLG+P+L KR+ + T+  ++ERVS +L+GW  
Sbjct: 520 FFSNNVSRDLEGLITAETGIGSTRELGKYLGMPVLQKRINKDTFGEVLERVSSRLSGWKS 579

Query: 548 RQLSFAGRITLAKS 589
           R LS AGRITL K+
Sbjct: 580 RSLSLAGRITLTKA 593