BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00046003
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004940621.1| ycf2 gene product [Neottia nidus-avis] gi|36...    50   1e-07
gb|AEK71891.1| hypothetical chloroplast RF2 [Tetrastigma yunnane...    51   1e-07
gb|AEK78279.1| hypothetical chloroplast RF2 [Simmondsia chinensis]     54   2e-07
gb|ADD30894.1| putative RF2 protein [Gunnera manicata] gi|340807...    53   3e-07
gb|AEX93975.1| hypothetical chloroplast RF21 (chloroplast) [Iris...    50   3e-07

>ref|YP_004940621.1| ycf2 gene product [Neottia nidus-avis]
            gi|364532656|ref|YP_004940627.1| ycf2 gene product
            [Neottia nidus-avis] gi|339717094|gb|AEJ88721.1|
            hypothetical protein RF2 [Neottia nidus-avis]
            gi|339717100|gb|AEJ88727.1| hypothetical protein RF2
            [Neottia nidus-avis]
          Length = 2227

 Score = 49.7 bits (117), Expect(2) = 1e-07
 Identities = 21/30 (70%), Positives = 25/30 (83%)
 Frame = +3

Query: 117  RNNSRKRSDNTDSYLSMISYHQNNWLNPMK 206
            RNN RK  DNTDSY SMIS+ ++NWLNP+K
Sbjct: 922  RNNRRKSFDNTDSYFSMISHDRDNWLNPVK 951



 Score = 32.3 bits (72), Expect(2) = 1e-07
 Identities = 13/16 (81%), Positives = 14/16 (87%)
 Frame = +1

Query: 61  PFLLKKIPKRLSDSFH 108
           PFL KKIPKR+ DSFH
Sbjct: 905 PFLFKKIPKRMIDSFH 920


>gb|AEK71891.1| hypothetical chloroplast RF2 [Tetrastigma yunnanense]
          Length = 2302

 Score = 51.2 bits (121), Expect(2) = 1e-07
 Identities = 22/30 (73%), Positives = 25/30 (83%)
 Frame = +3

Query: 117  RNNSRKRSDNTDSYLSMISYHQNNWLNPMK 206
            RNN RK  DNTDSY SMIS+ Q+NWLNP+K
Sbjct: 985  RNNRRKSFDNTDSYFSMISHDQDNWLNPVK 1014



 Score = 30.4 bits (67), Expect(2) = 1e-07
 Identities = 12/16 (75%), Positives = 13/16 (81%)
 Frame = +1

Query: 61   PFLLKKIPKRLSDSFH 108
            PFL  KIPKR+ DSFH
Sbjct: 968  PFLFNKIPKRMIDSFH 983


>gb|AEK78279.1| hypothetical chloroplast RF2 [Simmondsia chinensis]
          Length = 2279

 Score = 53.5 bits (127), Expect(2) = 2e-07
 Identities = 23/33 (69%), Positives = 26/33 (78%)
 Frame = +3

Query: 108  YSIRNNSRKRSDNTDSYLSMISYHQNNWLNPMK 206
            +  RNN RK  DNTDSY SMIS+ QNNWLNP+K
Sbjct: 977  FHTRNNRRKSFDNTDSYFSMISHDQNNWLNPVK 1009



 Score = 27.3 bits (59), Expect(2) = 2e-07
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +1

Query: 61   PFLLKKIPKRLSDSFH 108
            PFL  KIPK + DSFH
Sbjct: 963  PFLFNKIPKWMIDSFH 978


>gb|ADD30894.1| putative RF2 protein [Gunnera manicata] gi|340807148|gb|AEK71744.1|
            hypothetical chloroplast RF2 [Gunnera manicata]
          Length = 2306

 Score = 53.1 bits (126), Expect(2) = 3e-07
 Identities = 23/33 (69%), Positives = 27/33 (81%)
 Frame = +3

Query: 108  YSIRNNSRKRSDNTDSYLSMISYHQNNWLNPMK 206
            +  RNN RK  DNTDSYLSMIS+ Q+NWLNP+K
Sbjct: 968  FHTRNNRRKSFDNTDSYLSMISHDQDNWLNPVK 1000



 Score = 27.3 bits (59), Expect(2) = 3e-07
 Identities = 11/16 (68%), Positives = 12/16 (75%)
 Frame = +1

Query: 61   PFLLKKIPKRLSDSFH 108
            PFL  KIPK + DSFH
Sbjct: 954  PFLFNKIPKWMIDSFH 969


>gb|AEX93975.1| hypothetical chloroplast RF21 (chloroplast) [Iris tenax]
          Length = 2287

 Score = 50.1 bits (118), Expect(2) = 3e-07
 Identities = 21/33 (63%), Positives = 26/33 (78%)
 Frame = +3

Query: 108  YSIRNNSRKRSDNTDSYLSMISYHQNNWLNPMK 206
            +  RNN RK  DNTDSY SMIS+ ++NWLNP+K
Sbjct: 972  FHTRNNRRKSFDNTDSYFSMISHDRDNWLNPVK 1004



 Score = 30.4 bits (67), Expect(2) = 3e-07
 Identities = 12/16 (75%), Positives = 14/16 (87%)
 Frame = +1

Query: 61   PFLLKKIPKRLSDSFH 108
            PFL KKIPK ++DSFH
Sbjct: 958  PFLFKKIPKWMTDSFH 973