BLASTX nr result

ID: Cephaelis21_contig00045983 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00045983
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524786.1| conserved hypothetical protein [Ricinus comm...    67   2e-09
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta...    65   7e-09
emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis ...    59   3e-07
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210...    59   3e-07
gb|AAD37021.1| putative non-LTR retrolelement reverse transcript...    57   1e-06

>ref|XP_002524786.1| conserved hypothetical protein [Ricinus communis]
           gi|223535970|gb|EEF37629.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 105

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 28/62 (45%), Positives = 46/62 (74%)
 Frame = -2

Query: 195 QQAIKEKLGFSITTNLGQYLGVPVLHERRSKKTYHELVQKVEAKLNGWKHNQLTFAGRVI 16
           ++ +  KLG+ +T++LG+YLG+P+LH R +K TY  +V K+ +KL GW ++ L+ AGR+ 
Sbjct: 44  RRILASKLGYEMTSDLGKYLGMPILHGRINKNTYQGIVDKIGSKLAGWSNSCLSLAGRIT 103

Query: 15  LA 10
           LA
Sbjct: 104 LA 105


>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1231

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 28/65 (43%), Positives = 44/65 (67%)
 Frame = -2

Query: 195 QQAIKEKLGFSITTNLGQYLGVPVLHERRSKKTYHELVQKVEAKLNGWKHNQLTFAGRVI 16
           +Q I E+ G   T  LG+YLG+P+L +R +K+T+ E++++V A+L GWK   L+ AGR+ 
Sbjct: 595 EQLISEESGIGCTKELGKYLGMPILQKRMNKETFGEVLERVSARLAGWKGRSLSLAGRIT 654

Query: 15  LASLV 1
           L   V
Sbjct: 655 LTKAV 659


>emb|CAB10337.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268307|emb|CAB78601.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 929

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 27/72 (37%), Positives = 44/72 (61%)
 Frame = -2

Query: 216 NQIWSFFQQAIKEKLGFSITTNLGQYLGVPVLHERRSKKTYHELVQKVEAKLNGWKHNQL 37
           N +    +  I  + G   T  LG+YLG+PVL +R +K T+ E++++V ++L+GWK   L
Sbjct: 523 NNVSRDLEGLITAETGIGSTRELGKYLGMPVLQKRINKDTFGEVLERVSSRLSGWKSRSL 582

Query: 36  TFAGRVILASLV 1
           + AGR+ L   V
Sbjct: 583 SLAGRITLTKAV 594


>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
           putative protein [Arabidopsis thaliana]
          Length = 947

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/65 (40%), Positives = 43/65 (66%)
 Frame = -2

Query: 195 QQAIKEKLGFSITTNLGQYLGVPVLHERRSKKTYHELVQKVEAKLNGWKHNQLTFAGRVI 16
           ++ I ++ G   T  LG+YLG+P+L  R +K T+ E++++V ++L GWK   L+FAGR+ 
Sbjct: 409 EKLISKESGIKSTRELGKYLGMPILQRRINKDTFGEVLERVSSRLAGWKGRSLSFAGRLT 468

Query: 15  LASLV 1
           L   V
Sbjct: 469 LTKSV 473


>gb|AAD37021.1| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 732

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/62 (43%), Positives = 40/62 (64%)
 Frame = -2

Query: 186 IKEKLGFSITTNLGQYLGVPVLHERRSKKTYHELVQKVEAKLNGWKHNQLTFAGRVILAS 7
           I ++ G S T  LG+YLG+PVL  R +K T+ ++++K+  +L GWK   L+ AGRV L  
Sbjct: 260 ISDESGISSTRELGKYLGMPVLQRRINKDTFGDILEKLTTRLAGWKGRFLSLAGRVTLTK 319

Query: 6   LV 1
            V
Sbjct: 320 AV 321


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