BLASTX nr result

ID: Cephaelis21_contig00045951 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00045951
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD45562.1| reverse transcriptase [Elaeis guineensis]              55   2e-06
gb|EAZ22996.1| hypothetical protein OsJ_06691 [Oryza sativa Japo...    55   6e-06

>emb|CAD45562.1| reverse transcriptase [Elaeis guineensis]
          Length = 137

 Score = 55.5 bits (132), Expect(2) = 2e-06
 Identities = 28/64 (43%), Positives = 42/64 (65%)
 Frame = -2

Query: 278 RVLCD*LQPLMPTLISPEQL*FFQ*RDIHDNVLLAQELAQHLHKRLRGSNVIFKLDIMKA 99
           R+  D L  ++P +IS  Q  F + R+I +N+ LAQEL Q  +++  G NVI KLD+ KA
Sbjct: 18  RLFNDRLASILPLIISENQGAFVKGRNILENISLAQELTQEFNRKCYGHNVIIKLDMGKA 77

Query: 98  FDWV 87
           +DW+
Sbjct: 78  YDWL 81



 Score = 21.2 bits (43), Expect(2) = 2e-06
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -1

Query: 78  FF*KMLLRFGFSVALVNVI 22
           F  ++LLRFGF    VN I
Sbjct: 85  FLFQVLLRFGFHPGWVNYI 103


>gb|EAZ22996.1| hypothetical protein OsJ_06691 [Oryza sativa Japonica Group]
          Length = 476

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
 Frame = -2

Query: 260 LQPLMPTLISPEQL*FFQ*RDIHDNVLLAQELAQHLHKRLRGSNVIFKLDIMKAFDWVSR 81
           L PL+P ++S  Q  F + R IHDN LL Q++A+ L+ + + ++V+ KLDI KAFD V  
Sbjct: 5   LAPLLPGMVSVNQSAFVKRRSIHDNFLLVQQMARRLYSK-KEAHVMLKLDISKAFDSVDW 63

Query: 80  FFFEK--CYSGLASLW 39
            F  +  C+ G    W
Sbjct: 64  SFLLEVLCHLGFGRRW 79


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