BLASTX nr result

ID: Cephaelis21_contig00045859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00045859
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABL63118.1| AT-hook DNA-binding protein [Catharanthus roseus]       77   2e-12
ref|XP_002281296.1| PREDICTED: putative DNA-binding protein ESCA...    75   4e-12
ref|XP_002303540.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002299584.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002320066.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08

>gb|ABL63118.1| AT-hook DNA-binding protein [Catharanthus roseus]
          Length = 293

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 38/51 (74%), Positives = 41/51 (80%), Gaps = 3/51 (5%)
 Frame = +2

Query: 272 VSHSLPPPFNTRDFNLQHQF---NHNSEDEHSGTSGLNMGHKRDRDDHNDN 415
           + HSLPPPFNTRDFNLQHQF   NHNSEDE SGTSGL    KRDRD+ ND+
Sbjct: 1   MDHSLPPPFNTRDFNLQHQFHHQNHNSEDEQSGTSGL----KRDRDEKNDS 47


>ref|XP_002281296.1| PREDICTED: putative DNA-binding protein ESCAROLA-like [Vitis
           vinifera]
          Length = 302

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/61 (62%), Positives = 44/61 (72%), Gaps = 10/61 (16%)
 Frame = +2

Query: 263 MDPVS---HSLPPPFNTRDFNLQHQFNH-------NSEDEHSGTSGLNMGHKRDRDDHND 412
           MDPV+   HSLPPPF+TRD +L HQ  H       NSEDE SG+SGLN G KRDRDD+N+
Sbjct: 1   MDPVTAHGHSLPPPFHTRDLHLHHQQQHQFHPQQQNSEDEQSGSSGLNRGQKRDRDDNNE 60

Query: 413 N 415
           N
Sbjct: 61  N 61


>ref|XP_002303540.1| predicted protein [Populus trichocarpa] gi|222840972|gb|EEE78519.1|
           predicted protein [Populus trichocarpa]
          Length = 303

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 38/69 (55%), Positives = 48/69 (69%), Gaps = 15/69 (21%)
 Frame = +2

Query: 263 MDPVS---HSLPPPFNTRDFNL-------QHQFNH----NSEDEHSG-TSGLNMGHKRDR 397
           MDPV+   HSLPPPF+TRDF L       QHQF+H    NSEDE SG +SGLN   KR+R
Sbjct: 1   MDPVTAHGHSLPPPFHTRDFQLHHHQQQQQHQFHHQQQQNSEDEQSGSSSGLNKSLKRER 60

Query: 398 DDHNDNIMN 424
           D++N+++ N
Sbjct: 61  DENNNSMGN 69


>ref|XP_002299584.1| predicted protein [Populus trichocarpa] gi|222846842|gb|EEE84389.1|
           predicted protein [Populus trichocarpa]
          Length = 302

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 38/68 (55%), Positives = 47/68 (69%), Gaps = 14/68 (20%)
 Frame = +2

Query: 263 MDPVS---HSLPPPFNTRDFNL------QHQFNH----NSEDEHSG-TSGLNMGHKRDRD 400
           MDPV+   HSLPPPF+TRDF L      QHQF+H    NSEDE SG +SGLN   KR+RD
Sbjct: 1   MDPVTAHGHSLPPPFHTRDFQLHQQQQQQHQFHHQQQQNSEDEQSGSSSGLNKSLKRERD 60

Query: 401 DHNDNIMN 424
           + N+++ N
Sbjct: 61  ESNNSMGN 68


>ref|XP_002320066.1| predicted protein [Populus trichocarpa] gi|222860839|gb|EEE98381.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/58 (58%), Positives = 39/58 (67%), Gaps = 7/58 (12%)
 Frame = +2

Query: 263 MDPVS---HSLPPPFNTRDFNLQHQFNH----NSEDEHSGTSGLNMGHKRDRDDHNDN 415
           MDPVS     LPPPF+TRDF+L HQF H    NSEDE SG   LN G KR+ D+ N+N
Sbjct: 1   MDPVSAHGRPLPPPFHTRDFHL-HQFQHHQQQNSEDEQSGNGDLNRGQKREHDEINNN 57


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