BLASTX nr result

ID: Cephaelis21_contig00045847 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00045847
         (531 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera]   150   1e-34
ref|XP_002531775.1| pentatricopeptide repeat-containing protein,...   135   5e-30
ref|XP_002299078.1| predicted protein [Populus trichocarpa] gi|2...   118   6e-25
ref|XP_002524455.1| pentatricopeptide repeat-containing protein,...    86   3e-15
ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    85   6e-15

>emb|CAN62262.1| hypothetical protein VITISV_013985 [Vitis vinifera]
          Length = 531

 Score =  150 bits (379), Expect = 1e-34
 Identities = 84/167 (50%), Positives = 112/167 (67%)
 Frame = +1

Query: 31  AAAAVNTRIIEPRNVIKAPAARNSRISNSVVLLQMCHFPREVQQVHAQLIVSGLVQHHLN 210
           +++ +N++++  R   + PA        +V+LLQMCH  +EV+Q+HAQ IVSGL+    N
Sbjct: 8   SSSPLNSQLLLKRTPARMPA--------TVILLQMCHNFQEVRQIHAQFIVSGLLARPPN 59

Query: 211 PGRLIESYVSASHFSSALLVFESIPCPDLFAYNTMIRGLMLGPEFPDHMPLLLYQDLLSI 390
            GRL++SYVS S    ALLVF  IP PD+FAYN MIRGL LG     +  LLLY  LL +
Sbjct: 60  AGRLLDSYVSMSQIYYALLVFNRIPSPDVFAYNAMIRGLTLGN--CPYDSLLLYNKLL-L 116

Query: 391 RDLKADNHTFTFVLKTCSRMKAVSEGKQVHGQMIKVGLEPNTHTRSS 531
             L  DN+T+TFVLK CS +KA+ EGKQVH Q+IK G+ P+TH  +S
Sbjct: 117 GGLTPDNYTYTFVLKVCSHLKAIFEGKQVHCQVIKAGVAPDTHIHTS 163


>ref|XP_002531775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528611|gb|EEF30631.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 498

 Score =  135 bits (339), Expect = 5e-30
 Identities = 75/128 (58%), Positives = 91/128 (71%), Gaps = 1/128 (0%)
 Frame = +1

Query: 151 EVQQVHAQLIVSGLVQHHLNPGR-LIESYVSASHFSSALLVFESIPCPDLFAYNTMIRGL 327
           EV+Q+HAQ +VSGL+ HH   GR L+ESYV+ S  S A  +FE IP  D+F YNTMIRGL
Sbjct: 3   EVRQLHAQFVVSGLLNHHSLCGRRLLESYVTMSEISYARSIFERIPYLDVFVYNTMIRGL 62

Query: 328 MLGPEFPDHMPLLLYQDLLSIRDLKADNHTFTFVLKTCSRMKAVSEGKQVHGQMIKVGLE 507
           MLG    D   LLL+ +LL +  LK DN+T+TFVLK CS  KA+ EGKQVH Q+IK G+ 
Sbjct: 63  MLGKRPYDS--LLLFNELL-LGCLKPDNYTYTFVLKACSNQKALPEGKQVHCQIIKAGIS 119

Query: 508 PNTHTRSS 531
           PNTH  SS
Sbjct: 120 PNTHIHSS 127


>ref|XP_002299078.1| predicted protein [Populus trichocarpa] gi|222846336|gb|EEE83883.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score =  118 bits (295), Expect = 6e-25
 Identities = 65/146 (44%), Positives = 88/146 (60%), Gaps = 1/146 (0%)
 Frame = +1

Query: 97  NSRISNSVVLLQMCHFPREVQQVHAQLIVSGLVQHH-LNPGRLIESYVSASHFSSALLVF 273
           ++R   +++ L+ CH  +EV+Q+HAQ +VSGL+ +H L   RL+E+YV+ S    A  +F
Sbjct: 10  STRAPATIISLRTCHDFQEVKQLHAQFVVSGLLGYHPLCARRLLEAYVTMSQIYYAFSIF 69

Query: 274 ESIPCPDLFAYNTMIRGLMLGPEFPDHMPLLLYQDLLSIRDLKADNHTFTFVLKTCSRMK 453
           E IP PD+F YNTMIRGL +                        DN T+TFVLK CS +K
Sbjct: 70  ERIPSPDVFVYNTMIRGLTM------------------------DNFTYTFVLKACSHLK 105

Query: 454 AVSEGKQVHGQMIKVGLEPNTHTRSS 531
           A  EGKQVH Q+IK G+ P+TH  SS
Sbjct: 106 APFEGKQVHCQIIKAGIVPDTHIHSS 131


>ref|XP_002524455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536243|gb|EEF37895.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 486

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 56/165 (33%), Positives = 93/165 (56%), Gaps = 6/165 (3%)
 Frame = +1

Query: 55  IIEPRNV----IKAPAARNSRISNSVVLLQMCHFPREVQQVHAQLIVSGLVQHHLNPGRL 222
           II P N+       P  +  +   S+ LL  C   + ++Q+H+Q+I +GL   H    +L
Sbjct: 3   IISPANLQILPFSDPPYKFLQTHPSLTLLSTCKNLKTLKQIHSQVIKTGLHNTHFALSKL 62

Query: 223 IESYVSASH--FSSALLVFESIPCPDLFAYNTMIRGLMLGPEFPDHMPLLLYQDLLSIRD 396
           IE  V + +   S ALL+F+SI  P+   +N +IRGL L  E P  + +  Y D++S   
Sbjct: 63  IEFCVISPYGDLSYALLLFKSIGKPNQIIWNNIIRGLSLS-ESPI-LAIQYYVDMIS-SG 119

Query: 397 LKADNHTFTFVLKTCSRMKAVSEGKQVHGQMIKVGLEPNTHTRSS 531
              + +T+ FVLK+C+R+ +  EGKQ+HGQ++K+G + +    +S
Sbjct: 120 FTPNTYTYPFVLKSCARISSTHEGKQIHGQILKLGFDNDAFVHTS 164


>ref|XP_003549147.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g66520-like [Glycine max]
          Length = 622

 Score = 85.1 bits (209), Expect = 6e-15
 Identities = 49/135 (36%), Positives = 73/135 (54%)
 Frame = +1

Query: 109 SNSVVLLQMCHFPREVQQVHAQLIVSGLVQHHLNPGRLIESYVSASHFSSALLVFESIPC 288
           S  V L+  C   ++++Q HAQLI + L+ H ++  +L++    AS  S A  +F+ IP 
Sbjct: 17  SRLVSLIDSCKSMQQIKQTHAQLITTALISHPVSANKLLKLAACAS-LSYAHKLFDQIPQ 75

Query: 289 PDLFAYNTMIRGLMLGPEFPDHMPLLLYQDLLSIRDLKADNHTFTFVLKTCSRMKAVSEG 468
           PDLF YNTMI+   L P    H  L++++ L     L  + ++F F    C     V EG
Sbjct: 76  PDLFIYNTMIKAHSLSPH-SCHNSLIVFRSLTQDLGLFPNRYSFVFAFSACGNGLGVQEG 134

Query: 469 KQVHGQMIKVGLEPN 513
           +QV    +KVGLE N
Sbjct: 135 EQVRIHAVKVGLENN 149


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