BLASTX nr result

ID: Cephaelis21_contig00045619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00045619
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gy...   102   2e-20
emb|CAN74305.1| hypothetical protein VITISV_035483 [Vitis vinifera]   100   1e-19
gb|AAL59229.1|AF448416_9 gag-pol [Zea mays]                           100   1e-19
gb|ABF95991.1| retrotransposon protein, putative, Ty3-gypsy subc...   100   2e-19
gb|AAN04923.1| Putative retroelement [Oryza sativa Japonica Group]    100   2e-19

>gb|AAL79340.1|AC099402_4 Putative 22 kDa kafirin cluster; Ty3-Gypsy type [Oryza sativa]
            gi|21327374|gb|AAM48279.1|AC122148_32 Putative 22 kDa
            kafirin cluster; Ty3-Gypsy type [Oryza sativa Japonica
            Group] gi|31431495|gb|AAP53268.1| retrotransposon
            protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1230

 Score =  102 bits (255), Expect = 2e-20
 Identities = 50/96 (52%), Positives = 63/96 (65%)
 Frame = +1

Query: 4    NNSYQKSIEMAPYEVLYGRKCQTPTYWNEVGEKKIIAVENVPWIEDAYEKVKMXXXXXXX 183
            NNSYQ SI MAPYE LYGRKC+TP  WNEVGE+K++  +    I+   E +++       
Sbjct: 999  NNSYQSSIRMAPYEALYGRKCRTPVCWNEVGERKLLGPD---IIQQTKETIRLIRKRLQT 1055

Query: 184  XXXXXKSYSDNRRRDLEFEVGDTVFLKVLPRKGMIR 291
                 KSY DNRRRDL F++GD V+LKV P KG+ R
Sbjct: 1056 AQNRQKSYVDNRRRDLRFDIGDWVYLKVSPMKGVKR 1091


>emb|CAN74305.1| hypothetical protein VITISV_035483 [Vitis vinifera]
          Length = 366

 Score =  100 bits (249), Expect = 1e-19
 Identities = 50/96 (52%), Positives = 65/96 (67%)
 Frame = +1

Query: 4   NNSYQKSIEMAPYEVLYGRKCQTPTYWNEVGEKKIIAVENVPWIEDAYEKVKMXXXXXXX 183
           NN++Q SIEMAP+E LYGRKC++P  WN+VGE+K++  E    ++   EKV +       
Sbjct: 207 NNNFQASIEMAPFEALYGRKCRSPICWNDVGERKLLGSE---LVQLTVEKVALIKEILKT 263

Query: 184 XXXXXKSYSDNRRRDLEFEVGDTVFLKVLPRKGMIR 291
                KSY D+RRRDLEFEVGD VFLKV P K ++R
Sbjct: 264 TQSIHKSYVDHRRRDLEFEVGDHVFLKVSPMKSVMR 299


>gb|AAL59229.1|AF448416_9 gag-pol [Zea mays]
          Length = 1470

 Score =  100 bits (249), Expect = 1e-19
 Identities = 48/96 (50%), Positives = 66/96 (68%)
 Frame = +1

Query: 4    NNSYQKSIEMAPYEVLYGRKCQTPTYWNEVGEKKIIAVENVPWIEDAYEKVKMXXXXXXX 183
            NNSYQ S++MAP+E LYGRKC+TP YWN+ GE ++   E    +++A ++V++       
Sbjct: 1253 NNSYQASLKMAPFEALYGRKCRTPLYWNQTGESQVFGPE---ILQEAEKQVQIIRENLKT 1309

Query: 184  XXXXXKSYSDNRRRDLEFEVGDTVFLKVLPRKGMIR 291
                 KSY+DNRRR+L FEVGD V+LKV P +GM R
Sbjct: 1310 AQSRQKSYADNRRRELMFEVGDFVYLKVSPMRGMKR 1345


>gb|ABF95991.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1748

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/96 (50%), Positives = 65/96 (67%)
 Frame = +1

Query: 4    NNSYQKSIEMAPYEVLYGRKCQTPTYWNEVGEKKIIAVENVPWIEDAYEKVKMXXXXXXX 183
            NNSYQ SI+MAPYE LYGRKC+TP  W++VGE ++   +    + +A  KV++       
Sbjct: 1523 NNSYQASIQMAPYEALYGRKCRTPLLWDQVGESQVFGTD---ILREAEAKVRIIRDNLKV 1579

Query: 184  XXXXXKSYSDNRRRDLEFEVGDTVFLKVLPRKGMIR 291
                 KSY+DNRRRDLEF VGD V+L+V+P +G+ R
Sbjct: 1580 AQSRQKSYADNRRRDLEFAVGDFVYLRVMPLRGVHR 1615


>gb|AAN04923.1| Putative retroelement [Oryza sativa Japonica Group]
          Length = 1729

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 48/96 (50%), Positives = 64/96 (66%)
 Frame = +1

Query: 4    NNSYQKSIEMAPYEVLYGRKCQTPTYWNEVGEKKIIAVENVPWIEDAYEKVKMXXXXXXX 183
            NNSYQ S++MAPYE LYGRKC+TP  W++ GE+++   + V    +A EKVK+       
Sbjct: 1504 NNSYQASLQMAPYEALYGRKCRTPLLWDQTGERQVFGTDIV---REAEEKVKIIQERLRV 1560

Query: 184  XXXXXKSYSDNRRRDLEFEVGDTVFLKVLPRKGMIR 291
                 KSY+DNRRRDL FE GD V+L+V P +G+ R
Sbjct: 1561 AQSRHKSYADNRRRDLSFEEGDYVYLRVTPLRGVHR 1596


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