BLASTX nr result

ID: Cephaelis21_contig00045613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00045613
         (391 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK28489.1| unknown [Arabidopsis thaliana]                         112   3e-23
ref|NP_178997.2| uncharacterized protein [Arabidopsis thaliana] ...   112   3e-23
ref|XP_002308336.1| predicted protein [Populus trichocarpa] gi|2...    87   1e-15
dbj|BAD68552.1| ribosomal protein-like [Oryza sativa Japonica Gr...    87   1e-15
dbj|BAD46413.1| ribosomal protein-like [Oryza sativa Japonica Gr...    87   1e-15

>gb|ABK28489.1| unknown [Arabidopsis thaliana]
          Length = 344

 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/101 (55%), Positives = 70/101 (69%)
 Frame = +1

Query: 88  DEEVMYDMIQKNNFAIEQHCNELNSKVRRGGSIPGHIVINRDREIADRNLFIDYFCDNPR 267
           +++V+  +   NNF   QH    NS+   GGSI GH+VINRDRE   RNLFIDYF + P 
Sbjct: 30  EKQVVSQITTNNNFLCSQHL--YNSEGSHGGSIHGHVVINRDRENVARNLFIDYFAEKPV 87

Query: 268 YNDEKFRRRYRMSRSLFLRIVDAVKDRDRYFQQRRDALGRL 390
           + +  FRRR+RMSRSLFLRI DA+K  D YF QRRD +G+L
Sbjct: 88  FPETMFRRRFRMSRSLFLRIYDAIKRHDNYFVQRRDGVGKL 128


>ref|NP_178997.2| uncharacterized protein [Arabidopsis thaliana]
           gi|91806160|gb|ABE65808.1| hypothetical protein
           At2g13770 [Arabidopsis thaliana]
           gi|330251164|gb|AEC06258.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 343

 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/101 (55%), Positives = 70/101 (69%)
 Frame = +1

Query: 88  DEEVMYDMIQKNNFAIEQHCNELNSKVRRGGSIPGHIVINRDREIADRNLFIDYFCDNPR 267
           +++V+  +   NNF   QH    NS+   GGSI GH+VINRDRE   RNLFIDYF + P 
Sbjct: 30  EKQVVSQITTNNNFLCSQHL--YNSEGSHGGSIHGHVVINRDRENVARNLFIDYFAEKPV 87

Query: 268 YNDEKFRRRYRMSRSLFLRIVDAVKDRDRYFQQRRDALGRL 390
           + +  FRRR+RMSRSLFLRI DA+K  D YF QRRD +G+L
Sbjct: 88  FPETMFRRRFRMSRSLFLRIYDAIKRHDNYFVQRRDGVGKL 128


>ref|XP_002308336.1| predicted protein [Populus trichocarpa] gi|222854312|gb|EEE91859.1|
           predicted protein [Populus trichocarpa]
          Length = 360

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 40/85 (47%), Positives = 57/85 (67%)
 Frame = +1

Query: 136 EQHCNELNSKVRRGGSIPGHIVINRDREIADRNLFIDYFCDNPRYNDEKFRRRYRMSRSL 315
           E+  N    +    GSIPGH ++N +R+  +  L+ DYF +NP++   +FRRR+RMSR L
Sbjct: 32  EEESNNQGRRTGHRGSIPGHNIVNHNRKEGELRLYNDYFAENPKFTQSQFRRRFRMSRRL 91

Query: 316 FLRIVDAVKDRDRYFQQRRDALGRL 390
           FLRI +AV+  + YF+QR DALG L
Sbjct: 92  FLRIANAVEAHNPYFKQRTDALGVL 116


>dbj|BAD68552.1| ribosomal protein-like [Oryza sativa Japonica Group]
          Length = 436

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/72 (58%), Positives = 51/72 (70%)
 Frame = +1

Query: 175 GGSIPGHIVINRDREIADRNLFIDYFCDNPRYNDEKFRRRYRMSRSLFLRIVDAVKDRDR 354
           GGS+PGH    RDR  AD  L  DYF + P YN+E FRRR+RM R LFLRIVD V  ++R
Sbjct: 40  GGSVPGHKTYKRDRIAADWQLNQDYFVERPLYNEEHFRRRFRMRRELFLRIVDEVTAKNR 99

Query: 355 YFQQRRDALGRL 390
           +F QRR+A G+L
Sbjct: 100 FFTQRRNAAGQL 111


>dbj|BAD46413.1| ribosomal protein-like [Oryza sativa Japonica Group]
          Length = 373

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 42/72 (58%), Positives = 51/72 (70%)
 Frame = +1

Query: 175 GGSIPGHIVINRDREIADRNLFIDYFCDNPRYNDEKFRRRYRMSRSLFLRIVDAVKDRDR 354
           GGS+PGH    RDR  AD  L  DYF + P YN+E FRRR+RM R LFLRIVD V  ++R
Sbjct: 40  GGSVPGHKTYKRDRIAADWQLNEDYFVERPLYNEEHFRRRFRMRRELFLRIVDEVTAKNR 99

Query: 355 YFQQRRDALGRL 390
           +F QRR+A G+L
Sbjct: 100 FFTQRRNAAGQL 111


Top