BLASTX nr result

ID: Cephaelis21_contig00045591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00045591
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containi...    90   2e-32
ref|XP_002521729.1| pentatricopeptide repeat-containing protein,...    89   2e-28
ref|XP_002307219.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-28
ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containi...    89   1e-25
ref|NP_671862.1| pentatricopeptide repeat-containing protein [Ar...    85   7e-23

>ref|XP_002274224.2| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score = 90.1 bits (222), Expect(2) = 2e-32
 Identities = 40/61 (65%), Positives = 55/61 (90%)
 Frame = +3

Query: 165 YRALIHKLCTFHRFDTVQQLLDKMPSSIVSPPDEDGFITIICGLGRVRMMKQVIKVVELV 344
           YRALIHKLC+F RF+TV+++LD+MPSSI SPPDE  F+TI+ GLGR RM++Q+IKV++L+
Sbjct: 130 YRALIHKLCSFRRFETVKEVLDEMPSSIGSPPDESIFVTIVRGLGRARMVRQMIKVLDLI 189

Query: 345 S 347
           +
Sbjct: 190 T 190



 Score = 73.9 bits (180), Expect(2) = 2e-32
 Identities = 34/47 (72%), Positives = 39/47 (82%)
 Frame = +1

Query: 10  IQSRSISTALVPTHQQIAHFILEQKTANQALQTFRWASKAPNFTHSQ 150
           +QS+ IST  VPTHQ IAH ILEQK+A+QALQTFRWAS  PNF H+Q
Sbjct: 81  LQSKPISTTPVPTHQHIAHLILEQKSASQALQTFRWASNLPNFIHNQ 127


>ref|XP_002521729.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539120|gb|EEF40716.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 629

 Score = 89.4 bits (220), Expect(2) = 2e-28
 Identities = 42/61 (68%), Positives = 51/61 (83%)
 Frame = +3

Query: 165 YRALIHKLCTFHRFDTVQQLLDKMPSSIVSPPDEDGFITIICGLGRVRMMKQVIKVVELV 344
           YRALI KLC FHRFDTV QLLD+MP +I SPPDE+ F+T+I GLGR RM+  VIKV++L+
Sbjct: 75  YRALIQKLCAFHRFDTVYQLLDEMPHAIGSPPDEEIFLTVIRGLGRARMIPHVIKVLDLI 134

Query: 345 S 347
           S
Sbjct: 135 S 135



 Score = 61.6 bits (148), Expect(2) = 2e-28
 Identities = 28/48 (58%), Positives = 34/48 (70%)
 Frame = +1

Query: 7   RIQSRSISTALVPTHQQIAHFILEQKTANQALQTFRWASKAPNFTHSQ 150
           R  S S  +  VP+HQ IAH IL+Q +A +ALQTF+WAS  P FTHSQ
Sbjct: 25  RYSSSSTPSLSVPSHQHIAHLILDQNSATKALQTFKWASNLPKFTHSQ 72


>ref|XP_002307219.1| predicted protein [Populus trichocarpa] gi|222856668|gb|EEE94215.1|
           predicted protein [Populus trichocarpa]
          Length = 584

 Score = 84.3 bits (207), Expect(2) = 9e-28
 Identities = 42/61 (68%), Positives = 49/61 (80%)
 Frame = +3

Query: 165 YRALIHKLCTFHRFDTVQQLLDKMPSSIVSPPDEDGFITIICGLGRVRMMKQVIKVVELV 344
           YRALIHKL TF RF TVQ LLD+MP SI  PPDE  F+TII GLGR RM++ VIKV++LV
Sbjct: 51  YRALIHKLLTFRRFHTVQHLLDEMPKSIGLPPDESIFLTIIRGLGRARMIRDVIKVLDLV 110

Query: 345 S 347
           +
Sbjct: 111 T 111



 Score = 64.3 bits (155), Expect(2) = 9e-28
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = +1

Query: 40  VPTHQQIAHFILEQKTANQALQTFRWASKAPNFTHSQ 150
           VPTH++I H IL+QK+A QALQTF WASK PNFTHSQ
Sbjct: 12  VPTHERIVHLILDQKSAPQALQTFEWASKLPNFTHSQ 48


>ref|XP_003516519.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17525,
           mitochondrial-like [Glycine max]
          Length = 618

 Score = 89.0 bits (219), Expect(2) = 1e-25
 Identities = 43/60 (71%), Positives = 51/60 (85%)
 Frame = +3

Query: 165 YRALIHKLCTFHRFDTVQQLLDKMPSSIVSPPDEDGFITIICGLGRVRMMKQVIKVVELV 344
           YRALIHKLCTF RFDTV+QLLD+MP S+ +PP +D FITII GLGR RM + VIKV++LV
Sbjct: 72  YRALIHKLCTFRRFDTVKQLLDEMPHSLGAPPGDDIFITIIRGLGRARMTRTVIKVLDLV 131



 Score = 52.4 bits (124), Expect(2) = 1e-25
 Identities = 23/49 (46%), Positives = 36/49 (73%)
 Frame = +1

Query: 4   FRIQSRSISTALVPTHQQIAHFILEQKTANQALQTFRWASKAPNFTHSQ 150
           F+ Q+ S S++  P+ + ++  IL+QK+A++AL+ FRWAS  PNF HSQ
Sbjct: 22  FQFQTHSSSSS-APSQEHVSQLILDQKSASEALEYFRWASTVPNFVHSQ 69


>ref|NP_671862.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546776|sp|Q84VG6.2|PP160_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g17525, mitochondrial; Flags: Precursor
           gi|330251547|gb|AEC06641.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 626

 Score = 84.7 bits (208), Expect(2) = 7e-23
 Identities = 41/61 (67%), Positives = 48/61 (78%)
 Frame = +3

Query: 165 YRALIHKLCTFHRFDTVQQLLDKMPSSIVSPPDEDGFITIICGLGRVRMMKQVIKVVELV 344
           YRAL HKLC F RFDTV QLLD+MP SI  PPD+  F+TII G GR R++K+VI VV+LV
Sbjct: 79  YRALFHKLCVFRRFDTVYQLLDEMPDSIGLPPDDAIFVTIIRGFGRARLIKRVISVVDLV 138

Query: 345 S 347
           S
Sbjct: 139 S 139



 Score = 47.4 bits (111), Expect(2) = 7e-23
 Identities = 23/45 (51%), Positives = 29/45 (64%)
 Frame = +1

Query: 16  SRSISTALVPTHQQIAHFILEQKTANQALQTFRWASKAPNFTHSQ 150
           S S S   VP+   I   IL+QK+A+ AL+TFRWAS  P F HS+
Sbjct: 32  SSSSSLLSVPSDDHIVRLILDQKSASGALETFRWASTFPGFIHSR 76