BLASTX nr result

ID: Cephaelis21_contig00045585 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00045585
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]              90   2e-16
gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]               90   2e-16
gb|EAY75286.1| hypothetical protein OsI_03173 [Oryza sativa Indi...    84   9e-15
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    84   9e-15
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...    83   2e-14

>gb|AAF97969.1|AC000103_19 F21J9.30 [Arabidopsis thaliana]
          Length = 1270

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
 Frame = +2

Query: 20  LKKQLHTAYAEEELYWKQKSRVLWLQERDRNSKFFHASTTQRRRTNRLEYLEKERGGQCA 199
           LKK L  AY EEE YWKQKSR  WL+  +RNSK+FHA+  Q R+  R+E L K+  G   
Sbjct: 284 LKKDLAKAYREEEAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKL-KDVNGNMQ 342

Query: 200 DLNDITGEI-EQYFSELFASSNPSEFGEVLAGMPRSITEAMSRRLIRNVEME 352
                 GE+   YF  LF SSNPS F +  +G+   ++E M+  L+  V  +
Sbjct: 343 TSEAAKGEVAAAYFGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQ 394


>gb|AAG03119.1|AC004133_13 F5A9.24 [Arabidopsis thaliana]
          Length = 1254

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 49/112 (43%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
 Frame = +2

Query: 20  LKKQLHTAYAEEELYWKQKSRVLWLQERDRNSKFFHASTTQRRRTNRLEYLEKERGGQCA 199
           LKK L  AY EEE YWKQKSR  WL+  +RNSK+FHA+  Q R+  R+E L K+  G   
Sbjct: 287 LKKDLAKAYREEEAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKL-KDVNGNMQ 345

Query: 200 DLNDITGEI-EQYFSELFASSNPSEFGEVLAGMPRSITEAMSRRLIRNVEME 352
                 GE+   YF  LF SSNPS F +  +G+   ++E M+  L+  V  +
Sbjct: 346 TSEAAKGEVAAAYFGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQ 397


>gb|EAY75286.1| hypothetical protein OsI_03173 [Oryza sativa Indica Group]
          Length = 157

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/110 (37%), Positives = 64/110 (58%)
 Frame = +2

Query: 20  LKKQLHTAYAEEELYWKQKSRVLWLQERDRNSKFFHASTTQRRRTNRLEYLEKERGGQCA 199
           L++QL   +  EE+  KQ+SR+ WL+E DRN+ FFHA  + RRRTN+++ L ++ G  C+
Sbjct: 46  LEQQLCDLFEREEIMAKQRSRIEWLKEGDRNTSFFHARASARRRTNKIKLLVRDDGSSCS 105

Query: 200 DLNDITGEIEQYFSELFASSNPSEFGEVLAGMPRSITEAMSRRLIRNVEM 349
           +   I    E +F +LF S       EVL  +P  + E+++  L R   M
Sbjct: 106 ESQGIKLMAEHFFKKLFTSEQCESVEEVLEAIPCKVDESINEELCRPTRM 155


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1374

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 41/113 (36%), Positives = 65/113 (57%)
 Frame = +2

Query: 14  ADLKKQLHTAYAEEELYWKQKSRVLWLQERDRNSKFFHASTTQRRRTNRLEYLEKERGGQ 193
           A LKK+L   Y  EE +W++KSR++W++  DRN+K+FHA+T  RR  NR++ L  E G +
Sbjct: 319 ARLKKELSQEYNNEEQFWQEKSRIMWMRNGDRNTKYFHAATKNRRAQNRIQKLIDEEGRE 378

Query: 194 CADLNDITGEIEQYFSELFASSNPSEFGEVLAGMPRSITEAMSRRLIRNVEME 352
                D+    E YF +LFAS +     E L  +   +++ M+  L+  +  E
Sbjct: 379 WTSDEDLGRVAEAYFKKLFASEDVGYTVEELENLTPLVSDQMNNNLLAPITKE 431


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 44/102 (43%), Positives = 58/102 (56%)
 Frame = +2

Query: 17  DLKKQLHTAYAEEELYWKQKSRVLWLQERDRNSKFFHASTTQRRRTNRLEYLEKERGGQC 196
           +L  +L  AY +EE YW QKSR LW++  D NSKFFHA T QRR  NR+  L  E G   
Sbjct: 104 ELTLRLKEAYRDEEQYWYQKSRSLWMKLGDNNSKFFHALTKQRRARNRITGLHDENGIWS 163

Query: 197 ADLNDITGEIEQYFSELFASSNPSEFGEVLAGMPRSITEAMS 322
            + +DI      YF  LF ++NP  F E L  +   IT+ ++
Sbjct: 164 IEDDDIQNIAVSYFQNLFTTANPQVFDEALGEVQVLITDRIN 205


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