BLASTX nr result

ID: Cephaelis21_contig00045572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00045572
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28
ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containi...   122   2e-26
ref|XP_002531058.1| pentatricopeptide repeat-containing protein,...   120   1e-25
ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   115   3e-24
ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   113   1e-23

>ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  129 bits (324), Expect = 2e-28
 Identities = 64/92 (69%), Positives = 75/92 (81%)
 Frame = -1

Query: 277 KCIALLHSCASTNYYKLRQVHAFSIRHGVPLGSPDMGKHLIFTLVSLAAAGPRGSRPVMA 98
           KCIALL SCAS+ + K RQ+HAFSIRHGVPL +PDMGK+LIFTL+S  +         M+
Sbjct: 41  KCIALLLSCASSKF-KFRQIHAFSIRHGVPLTNPDMGKYLIFTLLSFCSP--------MS 91

Query: 97  YAHEIFNQIQNPNIFTWNTIIRGYAESENPNP 2
           YAH+IF+QIQNPNIFTWNT+IRGYAESENP P
Sbjct: 92  YAHQIFSQIQNPNIFTWNTMIRGYAESENPMP 123


>ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 591

 Score =  122 bits (307), Expect = 2e-26
 Identities = 59/92 (64%), Positives = 73/92 (79%)
 Frame = -1

Query: 277 KCIALLHSCASTNYYKLRQVHAFSIRHGVPLGSPDMGKHLIFTLVSLAAAGPRGSRPVMA 98
           KCI+LL  CAS+ + KL+Q+HAFSIRHGV L +PDMGKHLIFT+VSL+A         M+
Sbjct: 19  KCISLLQFCASSKH-KLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAP--------MS 69

Query: 97  YAHEIFNQIQNPNIFTWNTIIRGYAESENPNP 2
           YA+ +F  I NPN+FTWNTIIRGYAES+NP+P
Sbjct: 70  YAYNVFTVIHNPNVFTWNTIIRGYAESDNPSP 101


>ref|XP_002531058.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529353|gb|EEF31319.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 341

 Score =  120 bits (301), Expect = 1e-25
 Identities = 60/92 (65%), Positives = 71/92 (77%)
 Frame = -1

Query: 277 KCIALLHSCASTNYYKLRQVHAFSIRHGVPLGSPDMGKHLIFTLVSLAAAGPRGSRPVMA 98
           KCIALL  CAS+ Y KL+Q+HAFSIRHGV   +PDMGKHLI+++VS++A         M 
Sbjct: 41  KCIALLQICASSKY-KLQQIHAFSIRHGVLPNNPDMGKHLIYSIVSVSAP--------MT 91

Query: 97  YAHEIFNQIQNPNIFTWNTIIRGYAESENPNP 2
           YAH IF  IQNPNIFTWNT+IRG+AESENP P
Sbjct: 92  YAHNIFTLIQNPNIFTWNTMIRGHAESENPKP 123


>ref|XP_003547196.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Glycine max]
          Length = 661

 Score =  115 bits (289), Expect = 3e-24
 Identities = 57/95 (60%), Positives = 71/95 (74%), Gaps = 3/95 (3%)
 Frame = -1

Query: 277 KCIALLHSCASTNYYKLRQVHAFSIRHGVPLGSPDMGKHLIFTLVSLAAAGPRGSRP--- 107
           KCI LL  CAS+ + KLR +HAFSIRHGV L +PDMGKHLIFT+VSL+A           
Sbjct: 20  KCIYLLQFCASSKH-KLRXIHAFSIRHGVLLNNPDMGKHLIFTIVSLSAPMSYAYNVFTW 78

Query: 106 VMAYAHEIFNQIQNPNIFTWNTIIRGYAESENPNP 2
           V++YA+ +F  I NPN+FTWNT+ RGYAES+NP+P
Sbjct: 79  VLSYAYNVFTMIHNPNVFTWNTMTRGYAESDNPSP 113


>ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  113 bits (283), Expect = 1e-23
 Identities = 57/92 (61%), Positives = 70/92 (76%)
 Frame = -1

Query: 277 KCIALLHSCASTNYYKLRQVHAFSIRHGVPLGSPDMGKHLIFTLVSLAAAGPRGSRPVMA 98
           KCI+L+  C S+   KL+Q+HAFSIRHGVP  +PD  KHLIF LVSL+A         M+
Sbjct: 36  KCISLVQLCGSSQS-KLKQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAP--------MS 86

Query: 97  YAHEIFNQIQNPNIFTWNTIIRGYAESENPNP 2
           +A +IFNQIQ PNIFTWNT+IRG+AESENP+P
Sbjct: 87  FAAQIFNQIQAPNIFTWNTMIRGFAESENPSP 118


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