BLASTX nr result

ID: Cephaelis21_contig00045541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00045541
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_683305.2| Ribosomal L.8/L5e family protein [Arabidopsis t...   200   2e-49
ref|XP_004135173.1| PREDICTED: 50S ribosomal protein L18, chloro...   197   1e-48
gb|AFK37698.1| unknown [Lotus japonicus]                              193   2e-47
ref|XP_003518734.1| PREDICTED: 50S ribosomal protein L18, chloro...   192   4e-47
ref|XP_002522446.1| 50S ribosomal protein L18, chloroplast precu...   186   2e-45

>ref|NP_683305.2| Ribosomal L.8/L5e family protein [Arabidopsis thaliana]
           gi|332191001|gb|AEE29122.1| Ribosomal L.8/L5e family
           protein [Arabidopsis thaliana]
          Length = 165

 Score =  200 bits (508), Expect = 2e-49
 Identities = 100/128 (78%), Positives = 109/128 (85%)
 Frame = +1

Query: 64  MKPLVIEARNNTRTESAKTRNIRMRKKFNGTAEKPRLSVFCSDKQLYAMIVDDQQKKCLF 243
           +KP VIEAR NTR ES KTRN R RKKF GT  KPRLSVFCSDKQLYAM+VDD  KKCLF
Sbjct: 38  VKPFVIEARGNTRVESPKTRNRRSRKKFTGTQTKPRLSVFCSDKQLYAMLVDDFNKKCLF 97

Query: 244 YASTLQRSIRQDPCCTTIEAARRVGEELVKACIDLRIHEISSYDRNGLARDEKMQAFEIA 423
           YASTLQ+SIR DP CT IEAA+RVGEEL+KA IDL+I+EISSYDRNG  R E+MQAFEIA
Sbjct: 98  YASTLQKSIRGDPPCTVIEAAKRVGEELIKASIDLKINEISSYDRNGNKRGERMQAFEIA 157

Query: 424 ISHHGFLP 447
           I+ HGFLP
Sbjct: 158 IAQHGFLP 165


>ref|XP_004135173.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Cucumis
           sativus] gi|449478396|ref|XP_004155307.1| PREDICTED: 50S
           ribosomal protein L18, chloroplastic-like [Cucumis
           sativus]
          Length = 180

 Score =  197 bits (501), Expect = 1e-48
 Identities = 97/134 (72%), Positives = 110/134 (82%)
 Frame = +1

Query: 43  LGMKRVTMKPLVIEARNNTRTESAKTRNIRMRKKFNGTAEKPRLSVFCSDKQLYAMIVDD 222
           L  K   +KPL I+AR N++TESAK RN RM+KK+NGT  +PRLSVFCSDKQLYAM+VDD
Sbjct: 46  LKTKHCDVKPLTIQARGNSKTESAKVRNRRMQKKYNGTPTRPRLSVFCSDKQLYAMLVDD 105

Query: 223 QQKKCLFYASTLQRSIRQDPCCTTIEAARRVGEELVKACIDLRIHEISSYDRNGLARDEK 402
           Q KKCLFY STLQ+S+R  P CTTIEAA+ VGEELVK C+DL IHEIS YDRNG A  EK
Sbjct: 106 QNKKCLFYGSTLQKSMRPTPSCTTIEAAQHVGEELVKVCMDLNIHEISLYDRNGFACGEK 165

Query: 403 MQAFEIAISHHGFL 444
           MQAFEIAIS +GFL
Sbjct: 166 MQAFEIAISRYGFL 179


>gb|AFK37698.1| unknown [Lotus japonicus]
          Length = 164

 Score =  193 bits (490), Expect = 2e-47
 Identities = 93/128 (72%), Positives = 109/128 (85%)
 Frame = +1

Query: 67  KPLVIEARNNTRTESAKTRNIRMRKKFNGTAEKPRLSVFCSDKQLYAMIVDDQQKKCLFY 246
           KPLV+EAR NTRTES K RN RM+KKFNGTA  PRLSVFCSDKQLYAM+VDD+ KKCLFY
Sbjct: 37  KPLVVEARANTRTESPKIRNRRMQKKFNGTARHPRLSVFCSDKQLYAMLVDDKNKKCLFY 96

Query: 247 ASTLQRSIRQDPCCTTIEAARRVGEELVKACIDLRIHEISSYDRNGLARDEKMQAFEIAI 426
            STL +S R++P C+T+EAA+RVGE LVKAC DL+I+EISSYDRNG  R +++ AFEIAI
Sbjct: 97  GSTLHKSFRENPPCSTVEAAQRVGEALVKACTDLKINEISSYDRNGFGRGQRLDAFEIAI 156

Query: 427 SHHGFLPR 450
           S +GFL R
Sbjct: 157 SSYGFLQR 164


>ref|XP_003518734.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Glycine
           max]
          Length = 170

 Score =  192 bits (488), Expect = 4e-47
 Identities = 99/136 (72%), Positives = 114/136 (83%), Gaps = 3/136 (2%)
 Frame = +1

Query: 52  KRVTMKPLVIEARN--NTRTESAKTRNIRMRKKFNGTAEKPRLSVFCSDKQLYAMIVDDQ 225
           + +T KPLVIEAR   NTR ES K RN RM KK+NGTA  PRLSVFCSDKQLYAM+VDD+
Sbjct: 35  RSITKKPLVIEARARANTRKESGKIRNRRMLKKYNGTATHPRLSVFCSDKQLYAMLVDDK 94

Query: 226 QKKCLFYASTLQRSIRQDPCCTTIEAARRVGEELVKACIDLRIHEISSYDRNGL-ARDEK 402
            KKCLFY STLQ+SIRQDP C+T+EAA+RVGE LVKAC+DL I+EI SYDRNGL  R+EK
Sbjct: 95  NKKCLFYGSTLQKSIRQDPPCSTLEAAQRVGEALVKACVDLNINEILSYDRNGLRQREEK 154

Query: 403 MQAFEIAISHHGFLPR 450
           ++AFE AIS +GFLPR
Sbjct: 155 LKAFENAISSYGFLPR 170


>ref|XP_002522446.1| 50S ribosomal protein L18, chloroplast precursor, putative [Ricinus
           communis] gi|223538331|gb|EEF39938.1| 50S ribosomal
           protein L18, chloroplast precursor, putative [Ricinus
           communis]
          Length = 164

 Score =  186 bits (473), Expect = 2e-45
 Identities = 91/121 (75%), Positives = 103/121 (85%)
 Frame = +1

Query: 88  RNNTRTESAKTRNIRMRKKFNGTAEKPRLSVFCSDKQLYAMIVDDQQKKCLFYASTLQRS 267
           R NT+TESAKT NIR RKKFNGT  KPRLSVFCS KQLYAM+VDDQ KKCLFY STLQ+S
Sbjct: 44  RANTKTESAKTINIRRRKKFNGTPIKPRLSVFCSTKQLYAMLVDDQNKKCLFYGSTLQKS 103

Query: 268 IRQDPCCTTIEAARRVGEELVKACIDLRIHEISSYDRNGLARDEKMQAFEIAISHHGFLP 447
           +R  P C+ IEAA+ +GEELVKAC+DL ++EISSYDRNG  R E+MQAFE+AIS HGFLP
Sbjct: 104 LRGSPPCSKIEAAKCLGEELVKACVDLDVNEISSYDRNGFPRGERMQAFELAISRHGFLP 163

Query: 448 R 450
           R
Sbjct: 164 R 164


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