BLASTX nr result

ID: Cephaelis21_contig00044826 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00044826
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|2...   163   1e-38
ref|XP_003610927.1| Pentatricopeptide repeat-containing protein ...   163   2e-38
ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containi...   161   4e-38
ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containi...   157   6e-37
ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containi...   157   6e-37

>ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|222867101|gb|EEF04232.1|
           predicted protein [Populus trichocarpa]
          Length = 676

 Score =  163 bits (413), Expect = 1e-38
 Identities = 74/102 (72%), Positives = 89/102 (87%)
 Frame = +3

Query: 3   GTKPDHVTFVGVLSACAHAGLVDQGIKYFYSIREKYRLDYTIDHYACVIDLLSRAGRFGE 182
           GT+PDH+TFVGVLSACAHAGLVD+G+ YF+SI+E+Y L +T DHYAC+IDLL+R+G+F E
Sbjct: 400 GTQPDHITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDE 459

Query: 183 AEKIISNMPMKPDKFIWASLLNGCRVHGEPDLASKAAEALFE 308
           AE IIS M MKPDKF+WASLL GCR+HG   LA +AAEALFE
Sbjct: 460 AENIISKMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFE 501


>ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512262|gb|AES93885.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  163 bits (412), Expect = 2e-38
 Identities = 74/102 (72%), Positives = 89/102 (87%)
 Frame = +3

Query: 3   GTKPDHVTFVGVLSACAHAGLVDQGIKYFYSIREKYRLDYTIDHYACVIDLLSRAGRFGE 182
           GTKPD +TFVGVLSAC HAGLVD G++YF+S++EK+ L +T DHYACVIDLL+R+GRF E
Sbjct: 393 GTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKE 452

Query: 183 AEKIISNMPMKPDKFIWASLLNGCRVHGEPDLASKAAEALFE 308
           AE II NMPMKPDKF+WASLL GCR+HG  +LA +AA+ALFE
Sbjct: 453 AENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFE 494


>ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  161 bits (408), Expect = 4e-38
 Identities = 73/102 (71%), Positives = 90/102 (88%)
 Frame = +3

Query: 3   GTKPDHVTFVGVLSACAHAGLVDQGIKYFYSIREKYRLDYTIDHYACVIDLLSRAGRFGE 182
           GTKPD VT+VGVLSAC HAGLVD+G++YF+SI+EK+ L +T DHYACVIDLL+R+GRF E
Sbjct: 417 GTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYACVIDLLARSGRFKE 476

Query: 183 AEKIISNMPMKPDKFIWASLLNGCRVHGEPDLASKAAEALFE 308
           AE II NMP+KPDKF+WASLL GCR+HG  +LA +AA+AL+E
Sbjct: 477 AENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYE 518


>ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
           gi|449484855|ref|XP_004156999.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  157 bits (398), Expect = 6e-37
 Identities = 70/102 (68%), Positives = 90/102 (88%)
 Frame = +3

Query: 3   GTKPDHVTFVGVLSACAHAGLVDQGIKYFYSIREKYRLDYTIDHYACVIDLLSRAGRFGE 182
           GTKPD + F+GVLSACAHAGLVD+G++YF+SI+EK+ L  TIDHYAC+IDLL+RAG+F E
Sbjct: 448 GTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFTE 507

Query: 183 AEKIISNMPMKPDKFIWASLLNGCRVHGEPDLASKAAEALFE 308
           AE II+ MP+KPDK+IWA+LL GCR+HG  +LA +AA++LFE
Sbjct: 508 AESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFE 549


>ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like, partial [Vitis vinifera]
          Length = 287

 Score =  157 bits (398), Expect = 6e-37
 Identities = 72/102 (70%), Positives = 87/102 (85%)
 Frame = +3

Query: 3   GTKPDHVTFVGVLSACAHAGLVDQGIKYFYSIREKYRLDYTIDHYACVIDLLSRAGRFGE 182
           GT+PDH+TFVGVLSAC HAGLVD+G++YF SI+EK+ L +T DHYAC+IDLLSR+GR  E
Sbjct: 11  GTQPDHITFVGVLSACTHAGLVDKGLEYFDSIKEKHGLTHTADHYACLIDLLSRSGRLQE 70

Query: 183 AEKIISNMPMKPDKFIWASLLNGCRVHGEPDLASKAAEALFE 308
           AE II  MP++PDKF+WASLL GCR+HG   LA +AAEALFE
Sbjct: 71  AEDIIDKMPIEPDKFLWASLLGGCRIHGNLKLAKRAAEALFE 112


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