BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cephaelis21_contig00044478
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_063981.1| orf129a gene product (mitochondrion) [Beta vulg...    99   4e-19
ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulg...    99   4e-19
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga...    96   2e-18
emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thal...    88   4e-18
gb|AAC67331.1| putative non-LTR retroelement reverse transcripta...    89   2e-17

>ref|NP_063981.1| orf129a gene product (mitochondrion) [Beta vulgaris subsp.
           vulgaris] gi|9049283|dbj|BAA99293.1| orf129a [Beta
           vulgaris subsp. vulgaris]
          Length = 129

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/76 (59%), Positives = 56/76 (73%)
 Frame = -2

Query: 230 GKEYAGNCLLSQELVTRYARKRVSPRCLLKVDLRKAYDSVSWSFLRSVLRRLDFPPQFIF 51
           GK    N LL+ EL+  Y++K VSPRC++KVDLRKAYDS+ WSFL+ +L  L FP QFI 
Sbjct: 19  GKHIGDNILLATELIKGYSQKAVSPRCMIKVDLRKAYDSIEWSFLQCMLSELGFPSQFIT 78

Query: 50  WITQCVETASYSIKIN 3
           WI +CV T SYSI +N
Sbjct: 79  WIMECVTTVSYSILLN 94


>ref|YP_004222309.1| hypothetical protein BevumaM_p074 [Beta vulgaris subsp. maritima]
           gi|346683183|ref|YP_004842114.1| hypothetical protein
           BemaM_p069 [Beta macrocarpa]
           gi|319439824|emb|CBX33299.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500101|emb|CBX24919.1|
           hypothetical protein [Beta macrocarpa]
          Length = 238

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 45/76 (59%), Positives = 56/76 (73%)
 Frame = -2

Query: 230 GKEYAGNCLLSQELVTRYARKRVSPRCLLKVDLRKAYDSVSWSFLRSVLRRLDFPPQFIF 51
           GK    N LL+ EL+  Y++K VSPRC++KVDLRKAYDS+ WSFL+ +L  L FP QFI 
Sbjct: 19  GKHIGDNILLATELIKGYSQKAVSPRCMIKVDLRKAYDSIEWSFLQCMLSELGFPSQFIT 78

Query: 50  WITQCVETASYSIKIN 3
           WI +CV T SYSI +N
Sbjct: 79  WIMECVTTVSYSILLN 94


>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1110

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 41/76 (53%), Positives = 55/76 (72%)
 Frame = -2

Query: 230 GKEYAGNCLLSQELVTRYARKRVSPRCLLKVDLRKAYDSVSWSFLRSVLRRLDFPPQFIF 51
           G+  A N LL+ EL+  Y RK +SPRC++KVD+RKAYDSV WSFL ++L    FP +F+ 
Sbjct: 553 GRHIADNILLASELIRGYTRKHMSPRCIMKVDIRKAYDSVEWSFLETLLYEFGFPSRFVG 612

Query: 50  WITQCVETASYSIKIN 3
           WI +CV T SYS+ +N
Sbjct: 613 WIMECVSTVSYSVLVN 628


>emb|CAB45965.1| putative reverse transcriptase [Arabidopsis thaliana]
           gi|7267919|emb|CAB78261.1| putative reverse
           transcriptase [Arabidopsis thaliana]
          Length = 662

 Score = 87.8 bits (216), Expect(2) = 4e-18
 Identities = 39/70 (55%), Positives = 52/70 (74%)
 Frame = -2

Query: 212 NCLLSQELVTRYARKRVSPRCLLKVDLRKAYDSVSWSFLRSVLRRLDFPPQFIFWITQCV 33
           N LL+ ELV  Y +  VS RC +K+D+ KA+DSV WSFLR+VL  LDFP +F+ WI  CV
Sbjct: 92  NLLLATELVKDYHKDSVSERCAIKIDISKAFDSVQWSFLRNVLLTLDFPQEFVHWIMLCV 151

Query: 32  ETASYSIKIN 3
            TAS+S+++N
Sbjct: 152 TTASFSVQVN 161



 Score = 28.1 bits (61), Expect(2) = 4e-18
 Identities = 13/27 (48%), Positives = 19/27 (70%)
 Frame = -3

Query: 277 RVLPQIIDEAQAAFVEGRNMLETVYLA 197
           RVLPQ I   Q+AF++ R ++E + LA
Sbjct: 70  RVLPQFIAGNQSAFIKDRLLIENLLLA 96


>gb|AAC67331.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1449

 Score = 89.0 bits (219), Expect(2) = 2e-17
 Identities = 37/70 (52%), Positives = 53/70 (75%)
 Frame = -2

Query: 212  NCLLSQELVTRYARKRVSPRCLLKVDLRKAYDSVSWSFLRSVLRRLDFPPQFIFWITQCV 33
            N LL+ ELV  Y +  +S RC +K+D+ KA+DSV WSFL++VL  LDFPP+F+ W+  CV
Sbjct: 989  NLLLATELVKDYHKDTISGRCAIKIDISKAFDSVQWSFLKNVLSALDFPPEFVHWVMLCV 1048

Query: 32   ETASYSIKIN 3
             TAS+S+++N
Sbjct: 1049 TTASFSVQVN 1058



 Score = 24.6 bits (52), Expect(2) = 2e-17
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 274  VLPQIIDEAQAAFVEGRNMLETVYLA 197
            VLP  I   Q+AFV+ R ++E + LA
Sbjct: 968  VLPNFIAGNQSAFVKDRLLIENLLLA 993